RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 PTTG3PQ9NZH4 202 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ABRACLQ9P1F3 81 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CHRNA9Q9UGM1 479 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 FBXL4Q9UKA2 621 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 NCKAP1Q9Y2A7 1128 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 NUBP2Q9Y5Y2 271 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 SCN3AQ9NY46 2000 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 TBC1D3DA0A087WVF3 549 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 TBC1D3IA0A087WXS9 549 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 LRRC72A6NJI9 287 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 C10orf142B7Z368 130 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 TBC1D3LB9A6J9 549 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 NPIPB9F8W1W9 429 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 J3QLW9 94 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 SLC31A1O15431 190 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 EEF1E1O43324 174 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 FOXS1O43638 330 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 LDB3O75112 727 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 TMEM127O75204 238 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 GATBO75879 557 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 DHFRP00374 187 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 SERPINA3P01011 423 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 IFNGP01579 166 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 TFP02787 698 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 MRPL3P09001 348 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 OR2T7P0C7T2 308 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 TBC1D3HP0C7X1 549 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 SLC35E2P0CK97 266 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 SAGP10523 405 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 EPXP11678 715 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF19P17023 458 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 ATF1P18846 271 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 RAB3BP20337 219 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 NT5EP21589 574 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 NTSR1P30989 418 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 GABRA3P34903 492 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 HTR2BP41595 481 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 LSSP48449 732 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 PITPNAQ00169 270 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 DBPQ10586 325 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 MRPL28Q13084 256 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 KLF9Q13886 244 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 EXOSC7Q15024 291 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 CDK5R1Q15078 307 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 ANGPT1Q15389 498 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 FCN2Q15485 313 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF141Q15928 474 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 ZSWIM7Q19AV6 140 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 ISXQ2M1V0 245 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 CCDC58Q4VC31 144 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 CD276Q5ZPR3 534 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 FAM205BPQ63HN1 556 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 FCRLBQ6BAA4 426 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 TBC1D3CQ6IPX1 549 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 ENPP7Q6UWV6 458 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 RPTNQ6XPR3 784 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF782Q6ZMW2 699 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 ASB18Q6ZVZ8 466 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 PRSS41Q7RTY9 318 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 CDH24Q86UP0 819 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 TBC1D3Q8IZP1 549 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 CADM2Q8N3J6 435 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 ARHGEF39Q8N4T4 335 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 RFLNBQ8N5W9 214 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 POMGNT2Q8NAT1 580 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 OR11H7Q8NGC8 314 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 OR5H6Q8NGV6 325 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 OR2T27Q8NH04 317 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 OR51A7Q8NH64 312 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 BAHD1Q8TBE0 780 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 ADAMTS14Q8WXS8 1223 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 FAM3CQ92520 227 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 PHYHIPQ92561 330 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 SNAPC3Q92966 411 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 HGDQ93099 445 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 SMIM19Q96E16 107 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 PELI1Q96FA3 418 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 OR2M2Q96R28 347 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 GFM1Q96RP9 751 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 KXD1Q9BQD3 176 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 NMNAT2Q9BZQ4 307 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 TRIM2Q9C040 744 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 TMEM168Q9H0V1 697 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 OR51V1Q9H2C8 321 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 DPAGT1Q9H3H5 408 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 PLEKHA1Q9HB21 404 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 ZFP64Q9NPA5 681 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 COPZ2Q9P299 210 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 RABL2AQ9UBK7 228 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 SCML1Q9UN30 329 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 RABL2BQ9UNT1 228 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 CAMK2AQ9UQM7 478 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 ENTPD2Q9Y5L3 495 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 SPACA6W5XKT8 324 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 LRP4O75096 1905 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 DOCK8Q8NF50 2099 aa4.77□□□□□ -1.65
ATPAF1-212ENST00000542495 OR6C74A6NCV1 312 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF860A6NHJ4 632 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SMLR1H3BR10 107 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 AGRPO00253 132 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms