RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 ANKK1Q8NFD2 765 aa10.69□□□□□ -0.7
VTN-202ENST00000539746 OR5J2Q8NH18 312 aa10.69□□□□□ -0.7
VTN-202ENST00000539746 PNPLA2Q96AD5 504 aa10.69□□□□□ -0.7
VTN-202ENST00000539746 SCMH1Q96GD3 660 aa10.69□□□□□ -0.7
VTN-202ENST00000539746 SFXN2Q96NB2 322 aa10.69□□□□□ -0.7
VTN-202ENST00000539746 GPX7Q96SL4 187 aaPredicted RBP10.69□□□□□ -0.7
VTN-202ENST00000539746 NIPSNAP1Q9BPW8 284 aa10.69□□□□□ -0.7
VTN-202ENST00000539746 IFT27Q9BW83 186 aa10.69□□□□□ -0.7
VTN-202ENST00000539746 POLDIP3Q9BY77 421 aaKnown RBP10.69□□□□□ -0.7
VTN-202ENST00000539746 ACKR4Q9NPB9 350 aa10.69□□□□□ -0.7
VTN-202ENST00000539746 CHCHD3Q9NX63 227 aaKnown RBP10.69□□□□□ -0.7
VTN-202ENST00000539746 VNN3Q9NY84 501 aa10.69□□□□□ -0.7
VTN-202ENST00000539746 MRPL39Q9NYK5 338 aaKnown RBP10.69□□□□□ -0.7
VTN-202ENST00000539746 WASF3Q9UPY6 502 aa10.69□□□□□ -0.7
VTN-202ENST00000539746 RASD1Q9Y272 281 aa10.69□□□□□ -0.7
VTN-202ENST00000539746 VDAC3Q9Y277 283 aa10.69□□□□□ -0.7
VTN-202ENST00000539746 HIF3AQ9Y2N7 669 aa10.69□□□□□ -0.7
VTN-202ENST00000539746 SNX5Q9Y5X3 404 aa10.69□□□□□ -0.7
VTN-202ENST00000539746 A0A087WXM4 84 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 CENPBD1B2RD01 187 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 K7ENP7 123 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 KPNA4O00629 521 aaPredicted RBP10.68□□□□□ -0.7
VTN-202ENST00000539746 GNB5O14775 395 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 KLF4O43474 513 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 MAN1A2O60476 641 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 SEMA7AO75326 666 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 TRAPPC6AO75865 159 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 NEURL1O76050 574 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 HPNP05981 417 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 FCGR2AP12318 317 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 PTGDSP41222 190 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 PCYT1AP49585 367 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 MYBPC1Q00872 1141 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 FOXF1Q12946 379 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 PMS2P3Q13401 168 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 SLC10A1Q14973 349 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 SNAPC1Q16533 368 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 ZIK1Q3SY52 487 aaPredicted RBP10.68□□□□□ -0.7
VTN-202ENST00000539746 KLHL22Q53GT1 634 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 ALG10Q5BKT4 473 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 RPUSD3Q6P087 351 aaKnown RBP10.68□□□□□ -0.7
VTN-202ENST00000539746 INO80CQ6PI98 192 aaPredicted RBP10.68□□□□□ -0.7
VTN-202ENST00000539746 TBPL2Q6SJ96 375 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 ASB18Q6ZVZ8 466 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 H1FNTQ75WM6 255 aaPredicted RBP10.68□□□□□ -0.7
VTN-202ENST00000539746 PRICKLE2Q7Z3G6 844 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 MDGA2Q7Z553 956 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 COMTD1Q86VU5 262 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 JAZF1Q86VZ6 243 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 CHERPQ8IWX8 916 aaKnown RBP10.68□□□□□ -0.7
VTN-202ENST00000539746 PM20D2Q8IYS1 436 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 LNX2Q8N448 690 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 WDSUB1Q8N9V3 476 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 ZFP62Q8NB50 900 aaPredicted RBP10.68□□□□□ -0.7
VTN-202ENST00000539746 HAVCR2Q8TDQ0 301 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 ZNF566Q969W8 418 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 NTNG2Q96CW9 530 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 SNX18Q96RF0 628 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 ARHGAP9Q9BRR9 750 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 TSSK6Q9BXA6 273 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 OR52D1Q9H346 318 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 ZNF552Q9H707 407 aaPredicted RBP10.68□□□□□ -0.7
VTN-202ENST00000539746 CNOT2Q9NZN8 540 aaKnown RBP10.68□□□□□ -0.7
VTN-202ENST00000539746 GRHPRQ9UBQ7 328 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 NOX1Q9Y5S8 564 aa10.68□□□□□ -0.7
VTN-202ENST00000539746 PTPRZ1P23471 2315 aaPredicted RBP10.68□□□□□ -0.7
VTN-202ENST00000539746 OR6C65A6NJZ3 312 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 SLC22A31A6NKX4 558 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 LYPD3O95274 346 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 CH25HO95992 272 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 RENP00797 406 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 POU3F2P20265 443 aaPredicted RBP10.67□□□□□ -0.7
VTN-202ENST00000539746 EEF1B2P24534 225 aaKnown RBP10.67□□□□□ -0.7
VTN-202ENST00000539746 TTKP33981 857 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 GPR4P46093 362 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 RPS4XP62701 263 aaKnown RBP10.67□□□□□ -0.7
VTN-202ENST00000539746 TUBA4AP68366 448 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 CDK5Q00535 292 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 MVKQ03426 396 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 ZP4Q12836 540 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 PPP1R8Q12972 351 aaKnown RBP10.67□□□□□ -0.7
VTN-202ENST00000539746 GINS1Q14691 196 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 PGGHGQ32M88 737 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 NDUFAF6Q330K2 333 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 ADGRG3Q86Y34 549 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 EGFL6Q8IUX8 553 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 HS3ST5Q8IZT8 346 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 ZNF786Q8N393 782 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 SNRNP27Q8WVK2 155 aaKnown RBP10.67□□□□□ -0.7
VTN-202ENST00000539746 CPNE4Q96A23 557 aaPredicted RBP10.67□□□□□ -0.7
VTN-202ENST00000539746 MIB2Q96AX9 1013 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 ADAD1Q96M93 576 aaKnown RBP10.67□□□□□ -0.7
VTN-202ENST00000539746 MUS81Q96NY9 551 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 MBOAT4Q96T53 435 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 RACGAP1Q9H0H5 632 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 PLCXD1Q9NUJ7 323 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 SIGLEC7Q9Y286 467 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 RPH3AQ9Y2J0 694 aaPredicted RBP10.67□□□□□ -0.7
VTN-202ENST00000539746 KIF26BQ2KJY2 2108 aa10.67□□□□□ -0.7
VTN-202ENST00000539746 MYO15AQ9UKN7 3530 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 212.6 ms