RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 CLDN12P56749 244 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 LCN6P62502 163 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 ILKQ13418 452 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 GK2Q14410 553 aaPredicted RBP13.51□□□□□ -0.25
CACNB1-206ENST00000539338 VASNQ6EMK4 673 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 ATP13A2Q9NQ11 1180 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 SLX4Q8IY92 1834 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 AP1G1O43747 822 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 SERPINA5P05154 406 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 HMGA1P17096 107 aaKnown RBP13.51□□□□□ -0.25
CACNB1-206ENST00000539338 NPR2P20594 1047 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 DLSTP36957 453 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 CASP3P42574 277 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 VASPP50552 380 aaPredicted RBP13.51□□□□□ -0.25
CACNB1-206ENST00000539338 REEP5Q00765 189 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 GAB1Q13480 694 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 PLK5Q496M5 336 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 SLC6A19Q695T7 634 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 CD163Q86VB7 1156 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 IL17RCQ8NAC3 791 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 NEURL3Q96EH8 262 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 AMDHD1Q96NU7 426 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 ZPBPQ9BS86 351 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 UBQLN4Q9NRR5 601 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 FAM86C1Q9NVL1 165 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 CCDC187A0A096LP49 1063 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 hCG_1807616A0A1W2PRN6 198 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 SMCO3A2RU48 225 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 ABLIM3O94929 683 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 OR8U9P0C7N5 309 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 GPR18Q14330 331 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 LRRC56Q8IYG6 542 aaPredicted RBP13.51□□□□□ -0.25
CACNB1-206ENST00000539338 OR6T1Q8NGN1 323 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 ZNF285Q96NJ3 590 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 ELOVL3Q9HB03 270 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 PCDHGA5Q9Y5G8 931 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 KLK4Q9Y5K2 254 aa13.51□□□□□ -0.25
CACNB1-206ENST00000539338 MYH14Q7Z406 1995 aaKnown RBP13.51□□□□□ -0.25
CACNB1-206ENST00000539338 SOCS6O14544 535 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 CACNG3O60359 315 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 KDM4DQ6B0I6 523 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 SLC7A13Q8TCU3 470 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 TMEM255BQ8WV15 326 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 ASB16Q96NS5 453 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 MRI1Q9BV20 369 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 CLEC2DQ9UHP7 191 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 NRAPQ86VF7 1730 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 SULT2B1O00204 365 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 FZD7O75084 574 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 GABARAPO95166 117 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 OPRD1P41143 372 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 ZP2Q05996 745 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 APOOLQ6UXV4 268 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 SH2D5Q6ZV89 423 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 ABHD12BQ7Z5M8 362 aaPredicted RBP13.5□□□□□ -0.25
CACNB1-206ENST00000539338 CELF2-AS1Q8N7Q2 184 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 WBP2Q969T9 261 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 TBC1D20Q96BZ9 403 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 KATNB1Q9BVA0 655 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 NXF5Q9H1B4 397 aaKnown RBP13.5□□□□□ -0.25
CACNB1-206ENST00000539338 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.5□□□□□ -0.25
CACNB1-206ENST00000539338 CLEC2LP0C7M8 214 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 APEX1P27695 318 aaKnown RBP13.5□□□□□ -0.25
CACNB1-206ENST00000539338 SHC1P29353 583 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 AKR1C2P52895 323 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 LTBQ06643 244 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 USF2Q15853 346 aaPredicted RBP13.5□□□□□ -0.25
CACNB1-206ENST00000539338 ZNF175Q9Y473 711 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 RPL34P49207 117 aaKnown RBP13.5□□□□□ -0.25
CACNB1-206ENST00000539338 LYPD4Q6UWN0 246 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 MBOAT2Q6ZWT7 520 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 LIX1LQ8IVB5 337 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 HAVCR2Q8TDQ0 301 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 SPTSSAQ969W0 71 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 ABRACLQ9P1F3 81 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 GPR160Q9UJ42 338 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 HHLA2Q9UM44 414 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 CNTRLQ7Z7A1 2325 aa13.5□□□□□ -0.25
CACNB1-206ENST00000539338 SRPX2O60687 465 aaPredicted RBP13.49□□□□□ -0.25
CACNB1-206ENST00000539338 CXADRP78310 365 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 MRPS10P82664 201 aaKnown RBP13.49□□□□□ -0.25
CACNB1-206ENST00000539338 FAM71E1Q6IPT2 247 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 SLCO4A1Q96BD0 722 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 NUDT22Q9BRQ3 303 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 ATG4BQ9Y4P1 393 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 RREB1Q92766 1687 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.49□□□□□ -0.25
CACNB1-206ENST00000539338 RBM45Q8IUH3 476 aaKnown RBP13.49□□□□□ -0.25
CACNB1-206ENST00000539338 SLC35F3Q8IY50 421 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 IL17RDQ8NFM7 739 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 ZNF419Q96HQ0 510 aaPredicted RBP13.49□□□□□ -0.25
CACNB1-206ENST00000539338 A4GALTQ9NPC4 353 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 PLEKHJ1Q9NW61 149 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 PLEK2Q9NYT0 353 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 SLC6A5Q9Y345 797 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 HS3ST3A1Q9Y663 406 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 TMEM269A0A1B0GVZ9 245 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 K7ESM1 405 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 TP53P04637 393 aaPredicted RBP13.49□□□□□ -0.25
CACNB1-206ENST00000539338 MSX1P28360 303 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms