RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 BTBD16Q32M84 506 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 C22orf42Q6IC83 251 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 ARSKQ6UWY0 536 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 RPTNQ6XPR3 784 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 MEPCEQ7L2J0 689 aaKnown RBP12.85□□□□□ -0.35
ACTN1-205ENST00000538545 FOXN4Q96NZ1 517 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 TIMP4Q99727 224 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 TMED9Q9BVK6 235 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 HOXD1Q9GZZ0 328 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 FGF20Q9NP95 211 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-205ENST00000538545 NANSQ9NR45 359 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 ASB6Q9NWX5 421 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 ERVK13-1Q9NX77 482 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 QPCTLQ9NXS2 382 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 CHRNA9Q9UGM1 479 aa12.85□□□□□ -0.35
ACTN1-205ENST00000538545 MRTO4Q9UKD2 239 aaKnown RBP12.85□□□□□ -0.35
ACTN1-205ENST00000538545 SIRT4Q9Y6E7 314 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-205ENST00000538545 TEX13CA0A0J9YWL9 993 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 OR6C68A6NDL8 312 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 CCDC182A6NF36 153 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 RIIAD1A6NNX1 92 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 E9PI62 339 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 OR7A10O76100 309 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 NDUFB2O95178 105 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 FGF5P12034 268 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 BMP4P12644 408 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 PEPDP12955 493 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 CELP19835 753 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 IL11P20809 199 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 RPS27P42677 84 aaKnown RBP12.84□□□□□ -0.35
ACTN1-205ENST00000538545 LIMK1P53667 647 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 SLC26A5P58743 744 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 C1DQ13901 141 aaKnown RBP12.84□□□□□ -0.35
ACTN1-205ENST00000538545 QPRTQ15274 297 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 ZNF74Q16587 644 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 DGUOKQ16854 277 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 C3orf38Q5JPI3 329 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 PLEKHG7Q6ZR37 379 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 OR10G3Q8NGC4 313 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 OR5M1Q8NGP8 315 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 MCFD2Q8NI22 146 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 RFKQ969G6 155 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 CDADC1Q9BWV3 514 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 MMP25Q9NPA2 562 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 CHCHD3Q9NX63 227 aaKnown RBP12.84□□□□□ -0.35
ACTN1-205ENST00000538545 SLC39A1Q9NY26 324 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 TO15178 435 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 GPANK1O95872 356 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 UMODP07911 640 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 TSPAN19P0C672 248 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 SLC6A6P31641 620 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 RPS19P39019 145 aaKnown RBP12.84□□□□□ -0.35
ACTN1-205ENST00000538545 ADH7P40394 386 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 GRK6P43250 576 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 PNLIPRP2P54317 469 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 SH3BGRP55822 239 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-205ENST00000538545 DCAF7P61962 342 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 C1GALT1C1Q96EU7 318 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 HDHD5Q9BXW7 423 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 SEMA4CQ9C0C4 833 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 LAT2Q9GZY6 243 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 MRPS18AQ9NVS2 196 aaKnown RBP12.84□□□□□ -0.35
ACTN1-205ENST00000538545 SPTBN2O15020 2390 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 RTTNQ86VV8 2226 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 TTC36A6NLP5 189 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 CDX4O14627 284 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-205ENST00000538545 HOXD12P35452 270 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 MOGQ16653 247 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 PRAMEF20Q5VT98 475 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 C19orf48Q6RUI8 117 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 MARCH9Q86YJ5 346 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 ZNF485Q8NCK3 441 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 GPR119Q8TDV5 335 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 SNTG1Q9NSN8 517 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 GRIP1Q9Y3R0 1128 aa12.84□□□□□ -0.35
ACTN1-205ENST00000538545 ZFHX2Q9C0A1 2572 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-205ENST00000538545 SNTNA6NMZ2 147 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 G3V3Y1 287 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 DCTN6O00399 190 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 KLF7O75840 302 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-205ENST00000538545 ZNF3P17036 446 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 HK1P19367 917 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 PYCR1P32322 319 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 CDKN2AP42771 156 aaKnown RBP12.83□□□□□ -0.36
ACTN1-205ENST00000538545 DUSP3P51452 185 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-205ENST00000538545 NRG3P56975 720 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.83□□□□□ -0.36
ACTN1-205ENST00000538545 MLLT11Q13015 90 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-205ENST00000538545 FAM198BQ6UWH4 519 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 OR6K6Q8NGW6 343 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 ASPNQ9BXN1 380 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 MED17Q9NVC6 651 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 PPM1BO75688 479 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 TFP02787 698 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 CXCR1P25024 350 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 PSMA1P25786 263 aaKnown RBP12.83□□□□□ -0.36
ACTN1-205ENST00000538545 CTXN1P60606 82 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 VMP1Q96GC9 406 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 ARHGAP9Q9BRR9 750 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 ALG8Q9BVK2 526 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms