RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791		A0A1W2PPV4	95 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	ZNF593	O00488	134 aa	Predicted RBP	18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	TK1	P04183	234 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	ZNF91	Q05481	1191 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	TBCE	Q15813	527 aa	Predicted RBP	18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	UBE2NL	Q5JXB2	153 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	ZNF684	Q5T5D7	378 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	EDA	Q92838	391 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	MIB2	Q96AX9	1013 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	KCNJ16	Q9NPI9	418 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	ANKRD34B	A5PLL1	514 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	SERINC4	A6NH21	518 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	GABRP	O00591	440 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	ZNF674	Q2M3X9	581 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	LEXM	Q3ZCV2	418 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	KATNB1	Q9BVA0	655 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	DPM1	O60762	260 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	SLC5A2	P31639	672 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	GAB1	Q13480	694 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	VHLL	Q6RSH7	139 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	ZBED3	Q96IU2	234 aa	Predicted RBP	18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	C19orf12	Q9NSK7	152 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	CDHR4	A6H8M9	788 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	RAB40AL	P0C0E4	278 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	RRAD	P55042	308 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	CGB2	Q6NT52	195 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	C5orf46	Q6UWT4	87 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	NOXA1	Q86UR1	476 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	PGBD5	Q8N414	524 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	OR4M1	Q8NGD0	313 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	OR11L1	Q8NGX0	322 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	RAB40A	Q8WXH6	277 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	SAV1	Q9H4B6	383 aa	Predicted RBP	18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	IL37	Q9NZH6	218 aa		18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	NOSIP	Q9Y314	301 aa	Known RBP	18.19	■□□□□ 0.5
FGFR1-238	ENST00000532791	NAV1	Q8NEY1	1877 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	ZBTB42	B2RXF5	422 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	OR7A17	O14581	309 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	MSMO1	Q15800	293 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	FAM111B	Q6SJ93	734 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	ADAMTSL4	Q6UY14	1074 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	BEST4	Q8NFU0	473 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	OR8J2	Q8NGG1	315 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	C1orf198	Q9H425	327 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	IL1A	P01583	271 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	AFF3	P51826	1226 aa	Known RBP	18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	TAS2R46	P59540	309 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	ESX1	Q8N693	406 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	EMC9	Q9Y3B6	208 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	KRBA1	A5PL33	1030 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791		H7C1C5	153 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	GAST	P01350	101 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	OR8G3P	P0DMU2	310 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	FCGR2A	P12318	317 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	CHAT	P28329	748 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	LCN6	P62502	163 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	SLC35A1	P78382	337 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	GLB1L2	Q8IW92	636 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	HDAC8	Q9BY41	377 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	KIF25	Q9UIL4	384 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	TSPAN11	A1L157	253 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	GFRA2	O00451	464 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	REEP5	Q00765	189 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	SCGB2A2	Q13296	93 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	TMEM185A	Q8NFB2	350 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	SGK3	Q96BR1	496 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	RPS10P5	Q9NQ39	176 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	ATG4B	Q9Y4P1	393 aa		18.18	■□□□□ 0.5
FGFR1-238	ENST00000532791	SURF4	O15260	269 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	AP1G1	O43747	822 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	GPRIN2	O60269	458 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	PRKACB	P22694	351 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	OR2G6	Q5TZ20	316 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	FCRLA	Q7L513	359 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	LRRC56	Q8IYG6	542 aa	Predicted RBP	18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	BPIFB2	Q8N4F0	458 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	VN1R2	Q8NFZ6	395 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	SLC38A5	Q8WUX1	472 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	QRSL1	Q9H0R6	528 aa	Known RBP	18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	ANKRD19P	Q9H560	264 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	PDE4DIP	Q5VU43	2346 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	HOXB5	P09067	269 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	BBS1	Q8NFJ9	593 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	MUL1	Q969V5	352 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	PRAMEF27	A3QJZ7	478 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	HCRTR1	O43613	425 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	HLA-A	P01891	365 aa	Known RBP	18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	MTCP1	P56278	107 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	TNK1	Q13470	666 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	CLVS2	Q5SYC1	327 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	PRAMEF9	Q5VWM5	478 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	RFLNA	Q6ZTI6	216 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	UBTD2	Q8WUN7	234 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	SLAMF9	Q96A28	289 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	DCBLD2	Q96PD2	775 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	MED17	Q9NVC6	651 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	NXT1	Q9UKK6	140 aa	Known RBP	18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	MOK	Q9UQ07	419 aa		18.17	■□□□□ 0.5
FGFR1-238	ENST00000532791	RNF212B	A8MTL3	300 aa		18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms