RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 FCMRO60667 390 aa15.2■□□□□ 0.02
PKP3-208ENST00000531857 USF1P22415 310 aaPredicted RBP15.2■□□□□ 0.02
PKP3-208ENST00000531857 MERTKQ12866 999 aa15.2■□□□□ 0.02
PKP3-208ENST00000531857 GPR68Q15743 365 aa15.2■□□□□ 0.02
PKP3-208ENST00000531857 GABRA6Q16445 453 aa15.2■□□□□ 0.02
PKP3-208ENST00000531857 UGT3A2Q3SY77 523 aa15.2■□□□□ 0.02
PKP3-208ENST00000531857 SYT14P1Q58G82 188 aa15.2■□□□□ 0.02
PKP3-208ENST00000531857 KLHL17Q6TDP4 642 aa15.2■□□□□ 0.02
PKP3-208ENST00000531857 MAVSQ7Z434 540 aa15.2■□□□□ 0.02
PKP3-208ENST00000531857 TWIST2Q8WVJ9 160 aa15.2■□□□□ 0.02
PKP3-208ENST00000531857 ST8SIA1Q92185 356 aa15.2■□□□□ 0.02
PKP3-208ENST00000531857 APH1AQ96BI3 265 aa15.2■□□□□ 0.02
PKP3-208ENST00000531857 INPP5KQ9BT40 448 aa15.2■□□□□ 0.02
PKP3-208ENST00000531857 LAT2Q9GZY6 243 aa15.2■□□□□ 0.02
PKP3-208ENST00000531857 SERHL2Q9H4I8 314 aa15.2■□□□□ 0.02
PKP3-208ENST00000531857 EMC3Q9P0I2 261 aa15.2■□□□□ 0.02
PKP3-208ENST00000531857 NOSIPQ9Y314 301 aaKnown RBP15.2■□□□□ 0.02
PKP3-208ENST00000531857 SLC35F4A4IF30 521 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 PIP5K1BO14986 540 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 LMX1BO60663 402 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 ITGA5P08648 1049 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 KRT16P08779 473 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 IGFBP5P24593 272 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 EFNA4P52798 201 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 CSNK2A1P68400 391 aaPredicted RBP15.19■□□□□ 0.02
PKP3-208ENST00000531857 LSM11P83369 360 aaKnown RBP eCLIP15.19■□□□□ 0.02
PKP3-208ENST00000531857 KLF10Q13118 480 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 PDK3Q15120 406 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 ZNF141Q15928 474 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 LSM12Q3MHD2 195 aaKnown RBP15.19■□□□□ 0.02
PKP3-208ENST00000531857 CLEC4FQ8N1N0 589 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 KRTCAP2Q8N6L1 136 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 WDR31Q8NA23 367 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 SFXN5Q8TD22 340 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 PROX1Q92786 737 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 COQ8BQ96D53 544 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 MUS81Q96NY9 551 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 C1orf50Q9BV19 199 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 AMBRA1Q9C0C7 1298 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 SERINC1Q9NRX5 453 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 ACER3Q9NUN7 267 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 ASB6Q9NWX5 421 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 TAS2R1Q9NYW7 299 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 ATP23Q9Y6H3 246 aa15.19■□□□□ 0.02
PKP3-208ENST00000531857 PEX11AO75192 247 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 BCAS1O75363 584 aaPredicted RBP15.18■□□□□ 0.02
PKP3-208ENST00000531857 UGT2B17O75795 530 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 CIB2O75838 187 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 CSTAP01040 98 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 UBTFL6P0CB48 400 aaPredicted RBP15.18■□□□□ 0.02
PKP3-208ENST00000531857 TFPIP10646 304 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 DDX5P17844 614 aaKnown RBP15.18■□□□□ 0.02
PKP3-208ENST00000531857 THBS2P35442 1172 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 RPL3P39023 403 aaKnown RBP15.18■□□□□ 0.02
PKP3-208ENST00000531857 MXRA7P84157 204 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 SQLEQ14534 574 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 SLC9B1Q4ZJI4 515 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 C9orf135Q5VTT2 229 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 ZNF544Q6NX49 715 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 CCDC103Q8IW40 242 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 DEPDC4Q8N2C3 294 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 OR52E4Q8NGH9 312 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 TSPEARQ8WU66 669 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 ARL5BQ96KC2 179 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 NUF2Q9BZD4 464 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 CHODLQ9H9P2 273 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 TAS2R16Q9NYV7 291 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 MALT1Q9UDY8 824 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 MKLN1Q9UL63 735 aa15.18■□□□□ 0.02
PKP3-208ENST00000531857 VWC2LB2RUY7 222 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 SDHDO14521 159 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 CFLARO15519 480 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 SRD5A1P18405 259 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 PGM1P36871 562 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 MRPL19P49406 292 aaKnown RBP15.17■□□□□ 0.02
PKP3-208ENST00000531857 STX1BP61266 288 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 HBA1P69905 142 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 SLC25A3Q00325 362 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 MAPK14Q16539 360 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 SMU1Q2TAY7 513 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 NXNQ6DKJ4 435 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 C16orf89Q6UX73 402 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 SPATA19Q7Z5L4 167 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 TREML1Q86YW5 311 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 AGR3Q8TD06 166 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 SLC25A43Q8WUT9 341 aaPredicted RBP15.17■□□□□ 0.02
PKP3-208ENST00000531857 TMEM234Q8WY98 164 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 MOAP1Q96BY2 351 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 PPP3R2Q96LZ3 170 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 C3orf30Q96M34 536 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 OR11A1Q9GZK7 315 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 CTPS2Q9NRF8 586 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 ATAD3AQ9NVI7 634 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 ARMCX1Q9P291 453 aa15.17■□□□□ 0.02
PKP3-208ENST00000531857 PRPF19Q9UMS4 504 aaKnown RBP15.17■□□□□ 0.02
PKP3-208ENST00000531857 PDLIM1O00151 329 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 HAX1O00165 279 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 UBDO15205 165 aa15.16■□□□□ 0.02
PKP3-208ENST00000531857 MRPL33O75394 65 aaKnown RBP15.16■□□□□ 0.02
PKP3-208ENST00000531857 STX11O75558 287 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms