RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 OR2A1Q8NGT9 310 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 GATAD1Q8WUU5 269 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 HAS2Q92819 552 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 FAM162AQ96A26 154 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 RAD51AP1Q96B01 352 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 C19orf60Q96EN9 201 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 THOC1Q96FV9 657 aaKnown RBP4.04□□□□□ -1.76
CSDE1-212ENST00000529046 APOL2Q9BQE5 337 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 DESI2Q9BSY9 194 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 TMEM121Q9BTD3 319 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 IL22Q9GZX6 179 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 ILKAPQ9H0C8 392 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-212ENST00000529046 P2RY12Q9H244 342 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 FAM96AQ9H5X1 160 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 XKR8Q9H6D3 395 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 C10orf88Q9H8K7 445 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 CHST11Q9NPF2 352 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 CUTCQ9NTM9 273 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 SPATA7Q9P0W8 599 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 DHCR7Q9UBM7 475 aaKnown RBP4.04□□□□□ -1.76
CSDE1-212ENST00000529046 ZNF282Q9UDV7 671 aaPredicted RBP4.04□□□□□ -1.76
CSDE1-212ENST00000529046 ANAPC5Q9UJX4 755 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 ENTPD4Q9Y227 616 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 PRSS21Q9Y6M0 314 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 SHANK1Q9Y566 2161 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 DOPEY1Q5JWR5 2465 aa4.04□□□□□ -1.76
CSDE1-212ENST00000529046 SEC16AO15027 2179 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 MED13Q9UHV7 2174 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 ESPL1Q14674 2120 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 MAGEB16A2A368 324 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 CCDC162PA2VCL2 907 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 HTR3EA5X5Y0 456 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 PFDN6O15212 129 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 OR1I1O60431 355 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 SNX3O60493 162 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 CDC123O75794 336 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-212ENST00000529046 RNF224P0DH78 156 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 OTX2P32243 289 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 ATP6V1E1P36543 226 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 SLC26A3P40879 764 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 NKX2-1P43699 371 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-212ENST00000529046 CDX1P47902 265 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-212ENST00000529046 NPY2RP49146 381 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 HSPA14Q0VDF9 509 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 ILF2Q12905 390 aaKnown RBP4.03□□□□□ -1.76
CSDE1-212ENST00000529046 SRSF9Q13242 221 aaKnown RBP eCLIP4.03□□□□□ -1.76
CSDE1-212ENST00000529046 ART3Q13508 389 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 FAM53BQ14153 422 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 SQLEQ14534 574 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 TMED2Q15363 201 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 EXT1Q16394 746 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 TYSND1Q2T9J0 566 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 ANKRD20A4Q4UJ75 823 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 FASTKD1Q53R41 847 aaKnown RBP4.03□□□□□ -1.76
CSDE1-212ENST00000529046 PRR30Q53SZ7 412 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-212ENST00000529046 FFAR4Q5NUL3 377 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 TMEM205Q6UW68 189 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 ISLR2Q6UXK2 745 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 NDUFAF7Q7L592 441 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 LMNTD2Q8IXW0 634 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 CDK20Q8IZL9 346 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 BCORP1Q8N888 145 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 TTC29Q8NA56 475 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-212ENST00000529046 ADAD2Q8NCV1 583 aaKnown RBP4.03□□□□□ -1.76
CSDE1-212ENST00000529046 OR2L3Q8NG85 312 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 OR11G2Q8NGC1 345 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 OR52K1Q8NGK4 314 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 OR10G8Q8NGN5 311 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 OR13C3Q8NGS6 347 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 NAT14Q8WUY8 206 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 ZNRF4Q8WWF5 429 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 PSMF1Q92530 271 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 FOPNLQ96NB1 174 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 BIRC8Q96P09 236 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 NRTNQ99748 197 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 SELENOSQ9BQE4 189 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 KATNB1Q9BVA0 655 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 KIFC1Q9BW19 673 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 PFDN4Q9NQP4 134 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 HOMER3Q9NSC5 361 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 TREX1Q9NSU2 369 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 MAN2C1Q9NTJ4 1040 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 ATAD3AQ9NVI7 634 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 C14orf105Q9NVL8 296 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 UTP6Q9NYH9 597 aaKnown RBP4.03□□□□□ -1.76
CSDE1-212ENST00000529046 PAK5Q9P286 719 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 GNPTGQ9UJJ9 305 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 FBXL4Q9UKA2 621 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 TDRKHQ9Y2W6 561 aaKnown RBP4.03□□□□□ -1.76
CSDE1-212ENST00000529046 KLF2Q9Y5W3 355 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-212ENST00000529046 CRYBG3Q68DQ2 2970 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 ITPR2Q14571 2701 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 TNRC6AQ8NDV7 1962 aaKnown RBP4.03□□□□□ -1.76
CSDE1-212ENST00000529046 NBPF19A0A087WUL8 3843 aa4.03□□□□□ -1.76
CSDE1-212ENST00000529046 POLEQ07864 2286 aa4.02□□□□□ -1.77
CSDE1-212ENST00000529046 ICE1Q9Y2F5 2266 aa4.02□□□□□ -1.77
CSDE1-212ENST00000529046 PCM1Q15154 2024 aa4.02□□□□□ -1.77
CSDE1-212ENST00000529046 KCNE1BA0A087WTH5 132 aa4.02□□□□□ -1.77
CSDE1-212ENST00000529046 IGHV1-45A0A0A0MS14 117 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms