RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 TSPAN5P62079 268 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 BTG1P62324 171 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 DR1Q01658 176 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 PLOD1Q02809 727 aaPredicted RBP4.79□□□□□ -1.64
PCF11-202ENST00000528336 LRRC63Q05C16 580 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 GABPAQ06546 454 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 MICBQ29980 383 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 RGS21Q2M5E4 152 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 SBK1Q52WX2 424 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 PAQR6Q6TCH4 344 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 WASH2PQ6VEQ5 465 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 KIAA1328Q86T90 577 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 TMEM123Q8N131 208 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 PRSS33Q8NF86 280 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 CDC26Q8NHZ8 85 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 MARCH1Q8TCQ1 289 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 SCFD1Q8WVM8 642 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 CACNG8Q8WXS5 425 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 ARNTL2Q8WYA1 636 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 FAM3CQ92520 227 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 TAF15Q92804 592 aaKnown RBP eCLIP4.79□□□□□ -1.64
PCF11-202ENST00000528336 RPL3LQ92901 407 aaKnown RBP4.79□□□□□ -1.64
PCF11-202ENST00000528336 SLC25A36Q96CQ1 311 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 ALS2CR12Q96Q35 445 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 IL12RB2Q99665 862 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 NDUFAF3Q9BU61 184 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 PARD6BQ9BYG5 372 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 COA1Q9GZY4 146 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 GAL3ST2Q9H3Q3 398 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 ELOVL6Q9H5J4 265 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 NARFLQ9H6Q4 476 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 MARCH7Q9H992 704 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 ZNF275Q9NSD4 429 aaPredicted RBP4.79□□□□□ -1.64
PCF11-202ENST00000528336 C20orf96Q9NUD7 363 aaPredicted RBP4.79□□□□□ -1.64
PCF11-202ENST00000528336 ENPP5Q9UJA9 477 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 CSDC2Q9Y534 153 aaKnown RBP4.79□□□□□ -1.64
PCF11-202ENST00000528336 NPTNQ9Y639 398 aa4.79□□□□□ -1.64
PCF11-202ENST00000528336 NEDD4P46934 1319 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 CACNA1SQ13698 1873 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 COL4A5P29400 1685 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 LOC390937A0A1W2PQ73 354 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 FRG2CA6NGY1 282 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 BCKDKO14874 412 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 TFECO14948 347 aaPredicted RBP4.78□□□□□ -1.64
PCF11-202ENST00000528336 SYT7O43581 403 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 OR5F1O95221 314 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 MT-ND2P03891 347 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 ERCC1P07992 297 aaPredicted RBP4.78□□□□□ -1.64
PCF11-202ENST00000528336 HIST1H2AGP0C0S8 130 aaPredicted RBP4.78□□□□□ -1.64
PCF11-202ENST00000528336 AOC1P19801 751 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 GSTM3P21266 225 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 SRD5A2P31213 254 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 CASP4P49662 377 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 PAX5Q02548 391 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 ILKQ13418 452 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 GANABQ14697 944 aaKnown RBP4.78□□□□□ -1.64
PCF11-202ENST00000528336 ZNF343Q6P1L6 599 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 GDPGP1Q6ZNW5 385 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 PARGQ86W56 976 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 TGIF2LXQ8IUE1 241 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.78□□□□□ -1.64
PCF11-202ENST00000528336 GABRG1Q8N1C3 465 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 TMEM99Q8N816 258 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 OR7G1Q8NGA0 311 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 RPLP0P6Q8NHW5 317 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 RHEBL1Q8TAI7 183 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 HIST1H2ACQ93077 130 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 LHX4Q969G2 390 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 SH3YL1Q96HL8 342 aaPredicted RBP4.78□□□□□ -1.64
PCF11-202ENST00000528336 TECTBQ96PL2 329 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 CENPKQ9BS16 269 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 ST6GALNAC5Q9BVH7 336 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 ANGPTL4Q9BY76 406 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 MFFQ9GZY8 342 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 RAB1BQ9H0U4 201 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 FAM124BQ9H5Z6 455 aaPredicted RBP4.78□□□□□ -1.64
PCF11-202ENST00000528336 C3orf14Q9HBI5 128 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 ZNF302Q9NR11 478 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 ATPIF1Q9UII2 106 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 RPH3ALQ9UNE2 315 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 PCNX3Q9H6A9 2034 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 ZNF609O15014 1411 aa4.78□□□□□ -1.64
PCF11-202ENST00000528336 SPEF2Q9C093 1822 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 EPM2AB3EWF7 344 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 G3V2L1 256 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 WWP2O00308 870 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 RS1O15537 224 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 NDUFS6O75380 124 aaKnown RBP4.77□□□□□ -1.65
PCF11-202ENST00000528336 RPLP0P05388 317 aaKnown RBP4.77□□□□□ -1.65
PCF11-202ENST00000528336 ADORA1P30542 326 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 UGT1A5P35504 534 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 CYLC1P35663 651 aaPredicted RBP4.77□□□□□ -1.65
PCF11-202ENST00000528336 MAGEA9P43362 315 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 GYG1P46976 350 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 NDST2P52849 883 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 GEMP55040 296 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 TIMM10P62072 90 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 PPIAP62937 165 aaKnown RBP4.77□□□□□ -1.65
PCF11-202ENST00000528336 CDH17Q12864 832 aa4.77□□□□□ -1.65
PCF11-202ENST00000528336 EXOSC2Q13868 293 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms