RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ENAMQ9NRM1 1142 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 BABAM2Q9NXR7 383 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 KRBA1A5PL33 1030 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 MEGF11A6BM72 1044 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 FRG2CA6NGY1 282 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 RRP8O43159 456 aaKnown RBP13.88□□□□□ -0.19
USP47-207ENST00000527733 LCN1P31025 176 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 HNRNPFP52597 415 aaKnown RBP13.88□□□□□ -0.19
USP47-207ENST00000527733 CRMP1Q14194 572 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 DCBLD2Q96PD2 775 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 ENKD1Q9H0I2 346 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 SLC38A1Q9H2H9 487 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 SMURF1Q9HCE7 757 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 SLAMF7Q9NQ25 335 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 PARPBPQ9NWS1 579 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 CAMK2AQ9UQM7 478 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 WIF1Q9Y5W5 379 aa13.88□□□□□ -0.19
USP47-207ENST00000527733 OR7A10O76100 309 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 STK17BO94768 372 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 MT-CO3P00414 261 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 FKBP2P26885 142 aaKnown RBP13.87□□□□□ -0.19
USP47-207ENST00000527733 SLC14A1Q13336 389 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 FAM205BPQ63HN1 556 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 VASNQ6EMK4 673 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 MSRB3Q8IXL7 192 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 OR2L13Q8N349 312 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 OR5J2Q8NH18 312 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 RHOXF1Q8NHV9 184 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 ACOT12Q8WYK0 555 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 LAT2Q9GZY6 243 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 UCK1Q9HA47 277 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 SIRT5Q9NXA8 310 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 MOKQ9UQ07 419 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 A0A1W2PPV9 198 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 ZNF878C9JN71 531 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 SYT7O43581 403 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 MRPL33O75394 65 aaKnown RBP13.87□□□□□ -0.19
USP47-207ENST00000527733 LCATP04180 440 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 CDK4P11802 303 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 APOBEC1P41238 236 aaKnown RBP13.87□□□□□ -0.19
USP47-207ENST00000527733 NXNL2Q5VZ03 156 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 MINDY2Q8NBR6 621 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 FSCN3Q9NQT6 498 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 FBXO4Q9UKT5 387 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 F5H5K5 113 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 SOX3P41225 446 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 RNF4P78317 190 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 RELAQ04206 551 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 PMS2CLQ68D20 193 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 ZNF566Q969W8 418 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 PRRX2Q99811 253 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 SCN5AQ14524 2016 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 UNC13CQ8NB66 2214 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 PRKNO60260 465 aaPredicted RBP13.87□□□□□ -0.19
USP47-207ENST00000527733 WDPCPO95876 746 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 PIGAP37287 484 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 ENTPD1P49961 510 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 PCBP4P57723 403 aaKnown RBP13.87□□□□□ -0.19
USP47-207ENST00000527733 GNG2P59768 71 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 GRAMD2AQ8IUY3 354 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 ENTHD1Q8IYW4 607 aa13.87□□□□□ -0.19
USP47-207ENST00000527733 URM1Q9BTM9 101 aaKnown RBP13.87□□□□□ -0.19
USP47-207ENST00000527733 KDM4EB2RXH2 506 aaPredicted RBP13.86□□□□□ -0.19
USP47-207ENST00000527733 LRRN3E7EW58 273 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 LRRTM2O43300 516 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 TNFSF14O43557 240 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 BCAS1O75363 584 aaPredicted RBP13.86□□□□□ -0.19
USP47-207ENST00000527733 MAS1P04201 325 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 UCHL1P09936 223 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 KCTD20Q7Z5Y7 419 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 WDR5BQ86VZ2 330 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 OR1N1Q8NGS0 311 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 C4orf36Q96KX1 117 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 ALG12Q9BV10 488 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 MED20Q9H944 212 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 CDH20Q9HBT6 801 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 CLDN24A6NM45 220 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 ZNF701M0R085 212 aaPredicted RBP13.86□□□□□ -0.19
USP47-207ENST00000527733 PIP5K1CO60331 668 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 PRAMEF4O60810 478 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 ICOSLGO75144 302 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 CAPZA1P52907 286 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 ADARB1P78563 741 aaKnown RBP13.86□□□□□ -0.19
USP47-207ENST00000527733 PRAMEF9Q5VWM5 478 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 AAED1Q7RTV5 226 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 TIGD4Q8IY51 512 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 HPS1Q92902 700 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 SGCZQ96LD1 299 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 NMNAT3Q96T66 252 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 VN1R1Q9GZP7 353 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 WWTR1Q9GZV5 400 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 CHRNA9Q9UGM1 479 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 PSORS1C1Q9UIG5 152 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 THSD7BQ9C0I4 1608 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 SLC43A1O75387 559 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 CSN2P05814 226 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 RGS6P49758 472 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 C21orf58P58505 322 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 SMCO1Q147U7 214 aa13.86□□□□□ -0.19
USP47-207ENST00000527733 CARTPTQ16568 116 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms