RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 BGLAPP02818 100 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 CDK1P06493 297 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 PEPDP12955 493 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 ADH6P28332 368 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 EIF1P41567 113 aaKnown RBP18.58■□□□□ 0.56
SMCO4-203ENST00000526869 NUDT6P53370 316 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 SOX8P57073 446 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 TGIF1Q15583 401 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 ZNF468Q5VIY5 522 aaPredicted RBP18.58■□□□□ 0.56
SMCO4-203ENST00000526869 PRAMEF20Q5VT98 475 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 C1orf140Q5VVS0 124 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 BORAQ6PGQ7 559 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 DPY19L2P2Q6ZN68 376 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 AHSA2Q719I0 299 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 SATL1Q86VE3 508 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 BEST3Q8N1M1 668 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 C10orf53Q8N6V4 93 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 CLEC1AQ8NC01 280 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 THAP4Q8WY91 577 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 TAAR8Q969N4 342 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 ZBTB8AQ96BR9 441 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 NXPE2Q96DL1 559 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 ZNF582Q96NG8 517 aaPredicted RBP18.58■□□□□ 0.56
SMCO4-203ENST00000526869 SACM1LQ9NTJ5 587 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 CHRNA9Q9UGM1 479 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 IL20RAQ9UHF4 553 aa18.58■□□□□ 0.56
SMCO4-203ENST00000526869 DMXL1Q9Y485 3027 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 IRGMA1A4Y4 181 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 OR2T1O43869 369 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 FZD7O75084 574 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 AHSA1O95433 338 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 MT-ND2P03891 347 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 P04436 131 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 APEHP13798 732 aaKnown RBP18.57■□□□□ 0.56
SMCO4-203ENST00000526869 SDHBP21912 280 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 FKBP2P26885 142 aaKnown RBP18.57■□□□□ 0.56
SMCO4-203ENST00000526869 UQCRC1P31930 480 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 CASRP41180 1078 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 CYB561P49447 251 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 RRADP55042 308 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 FOXK2Q01167 660 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 ZNF91Q05481 1191 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 LTBQ06643 244 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 FOXF1Q12946 379 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 FAM69AQ5T7M9 428 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 ABHD17BQ5VST6 288 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 AADACL4Q5VUY2 407 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 XAF1Q6GPH4 301 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 ARSKQ6UWY0 536 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 MAMDC2Q7Z304 686 aaPredicted RBP18.57■□□□□ 0.56
SMCO4-203ENST00000526869 LRRC17Q8N6Y2 441 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 RFKQ969G6 155 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 MOGAT1Q96PD6 335 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 RHNO1Q9BSD3 238 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 PTDSS2Q9BVG9 487 aa18.57■□□□□ 0.56
SMCO4-203ENST00000526869 MRPS18AQ9NVS2 196 aaKnown RBP18.57■□□□□ 0.56
SMCO4-203ENST00000526869 RIIAD1A6NNX1 92 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 LRRN3E7EW58 273 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 ARPC3O15145 178 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 GFRA3O60609 400 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 TRIM3O75382 744 aaPredicted RBP18.56■□□□□ 0.56
SMCO4-203ENST00000526869 PPP1R3DO95685 299 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 IFNGP01579 166 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 HIST1H2ABP04908 130 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 DBTP11182 482 aaKnown RBP18.56■□□□□ 0.56
SMCO4-203ENST00000526869 HK1P19367 917 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 CCNA2P20248 432 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 PCMT1P22061 227 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 ITGA3P26006 1051 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 PIGFQ07326 219 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 MFSD13AQ14CX5 517 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 CRTC2Q53ET0 693 aaPredicted RBP18.56■□□□□ 0.56
SMCO4-203ENST00000526869 NXNL2Q5VZ03 156 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 HIST3H2AQ7L7L0 130 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 NANOGNBQ7Z5D8 188 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 ANKK1Q8NFD2 765 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 C9orf43Q8TAL5 461 aaPredicted RBP18.56■□□□□ 0.56
SMCO4-203ENST00000526869 HIST1H2ACQ93077 130 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 MUL1Q969V5 352 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 DDIT4LQ96D03 193 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 POTEKPQ9BYX7 375 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 CCDC90BQ9GZT6 254 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 SERINC1Q9NRX5 453 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 GPR83Q9NYM4 423 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 STMN3Q9NZ72 180 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 KLHL21Q9UJP4 597 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 FBXL2Q9UKC9 423 aa18.56■□□□□ 0.56
SMCO4-203ENST00000526869 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.56■□□□□ 0.563e-6■■■■□ 23.8
SMCO4-203ENST00000526869 SPIN1Q9Y657 262 aaPredicted RBP18.56■□□□□ 0.56
SMCO4-203ENST00000526869 CPAMD8Q8IZJ3 1885 aa18.55■□□□□ 0.56
SMCO4-203ENST00000526869 ZC3H12DA2A288 527 aaKnown RBP18.55■□□□□ 0.56
SMCO4-203ENST00000526869 IMPA2O14732 288 aa18.55■□□□□ 0.56
SMCO4-203ENST00000526869 WISP1O95388 367 aa18.55■□□□□ 0.56
SMCO4-203ENST00000526869 RPS5P46782 204 aaKnown RBP18.55■□□□□ 0.56
SMCO4-203ENST00000526869 MASP1P48740 699 aa18.55■□□□□ 0.56
SMCO4-203ENST00000526869 DSCR4P56555 118 aaPredicted RBP18.55■□□□□ 0.56
SMCO4-203ENST00000526869 TMED1Q13445 227 aa18.55■□□□□ 0.56
SMCO4-203ENST00000526869 TUBA3CQ13748 450 aa18.55■□□□□ 0.56
SMCO4-203ENST00000526869 TBCEQ15813 527 aaPredicted RBP18.55■□□□□ 0.56
SMCO4-203ENST00000526869 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms