RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 SYNPO2LQ9H987 977 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 MED11Q9P086 117 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 SNU13P55769 128 aaKnown RBP12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 ZNF584Q8IVC4 421 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 LRRC56Q8IYG6 542 aaPredicted RBP12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 KDM8Q8N371 416 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 SLC2A12Q8TD20 617 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 CHST8Q9H2A9 424 aa12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 ZNF701Q9NV72 531 aaPredicted RBP12.08□□□□□ -0.48
PCDHGB1-201ENST00000523390 NCOR1O75376 2440 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 TRAV18A0A075B6X5 111 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 FXYD6-FXYD2A0A087WZ82 144 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 LCATP04180 440 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 ERCC1P07992 297 aaPredicted RBP12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 POU2F2P09086 479 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 IL9P15248 144 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 GLB1P16278 677 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 C17orf67Q0P5P2 114 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 SFRP4Q6FHJ7 346 aaPredicted RBP12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 ACSM5Q6NUN0 579 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 CENPOQ9BU64 300 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 FXYD6Q9H0Q3 95 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 SYT4Q9H2B2 425 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 MED17Q9NVC6 651 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 SLC7A11Q9UPY5 501 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR2A25A4D2G3 310 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 HOXD12P35452 270 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 KIR2DL1P43626 348 aaPredicted RBP12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 POLR2HP52434 150 aaKnown RBP12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 FGL2Q14314 439 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 C3orf38Q5JPI3 329 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 IFI44Q8TCB0 444 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 ELP5Q8TE02 316 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 SGCDQ92629 289 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 URM1Q9BTM9 101 aaKnown RBP12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 POLE3Q9NRF9 147 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 ACAD8Q9UKU7 415 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 RASD1Q9Y272 281 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 SLC6A5Q9Y345 797 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 KCNE3Q9Y6H6 103 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 P2RX6O15547 441 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 HSPA12AO43301 675 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 GSTT2P0CG29 244 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 NME1P15531 152 aaKnown RBP12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 POU3F2P20265 443 aaPredicted RBP12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 HYAL4Q2M3T9 481 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 MTFR2Q6P444 385 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 PRSS41Q7RTY9 318 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 DPY19L4Q7Z388 723 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 ASB12Q8WXK4 309 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 HOXB13Q92826 284 aaPredicted RBP12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 ELOVL3Q9HB03 270 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 NXT1Q9UKK6 140 aaKnown RBP12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 SCN3AQ9NY46 2000 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 SVILO95425 2214 aa12.07□□□□□ -0.48
PCDHGB1-201ENST00000523390 TEX13DA0A0J9YY54 714 aaPredicted RBP12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 RIN1Q13671 783 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 MELKQ14680 651 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 SPIN3Q5JUX0 258 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 NXNL2Q5VZ03 156 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 CALHM3Q86XJ0 350 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 RASD2Q96D21 266 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 ANKRD19PQ9H560 264 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 METTL8Q9H825 291 aaKnown RBP12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 BCL2L10Q9HD36 194 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 HSPB11Q9Y547 144 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 C13orf42A0A1B0GVH6 325 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 AGAP5A6NIR3 686 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 PIAS2O75928 621 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 APOC1P02654 83 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 YES1P07947 543 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 CD14P08571 375 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 DRD5P21918 477 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 LIPAP38571 399 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 RPS25P62851 125 aaKnown RBP12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 KCTD9Q7L273 389 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 ZSCAN1Q8NBB4 408 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 OR5T2Q8NGG2 359 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 MOV10Q9HCE1 1003 aaKnown RBP12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 ZNF160Q9HCG1 818 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 NDRG4Q9ULP0 352 aaKnown RBP12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 ASB4Q9Y574 426 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 CD63P08962 238 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 GRK5P34947 590 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 SSR4P51571 173 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 PPP1CAP62136 330 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 DHRS4L2Q6PKH6 230 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 LINC00696Q6ZRV3 163 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 SLC46A3Q7Z3Q1 461 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 NTN4Q9HB63 628 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 WDR90Q96KV7 1748 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 ACOD1A6NK06 481 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 DISC1C4P0D8 188 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 GABRPO00591 440 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 PRAMEF4O60810 478 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 WDPCPO95876 746 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 THBS1P07996 1170 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 DPP4P27487 766 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 CD40LGP29965 261 aa12.06□□□□□ -0.48
PCDHGB1-201ENST00000523390 CSNK2A1P68400 391 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms