RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 PIAS1O75925 651 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 URI1O94763 535 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 TTC4O95801 387 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 IGHV3-9P01782 118 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 KLK1P06870 262 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 CD1DP15813 335 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 CSNK2A2P19784 350 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 PTAFRP25105 342 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 GIFP27352 417 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 SFTPDP35247 375 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 OR3A2P47893 321 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 CLK3P49761 638 aaKnown RBP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 ARFIP1P53367 373 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 PSG6Q00889 435 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 CHRNB3Q05901 458 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 ZNF155Q12901 538 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 MORF4L2Q15014 288 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 RNPS1Q15287 305 aaKnown RBP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 ERCC6LQ2NKX8 1250 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 PLPPR5Q32ZL2 321 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 GLYR1Q49A26 553 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 FAM209BQ5JX69 171 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 SH2D4BQ5SQS7 431 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 ZNF362Q5T0B9 420 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 RNASEH2BQ5TBB1 312 aaKnown RBP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 SHQ1Q6PI26 577 aaKnown RBP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 ZNF551Q7Z340 670 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 SLC46A3Q7Z3Q1 461 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 EXOC3L1Q86VI1 746 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 GTPBP8Q8N3Z3 284 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 ZDHHC22Q8N966 263 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 OR9A2Q8NGT5 310 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 WDR20Q8TBZ3 569 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 UBTD2Q8WUN7 234 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 TAF15Q92804 592 aaKnown RBP eCLIP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 FBXO17Q96EF6 278 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 ZNF681Q96N22 645 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 ZNF300Q96RE9 604 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 C1QTNF6Q9BXI9 259 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 C1QTNF5Q9BXJ0 243 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 COQ10BQ9H8M1 238 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 LPAR2Q9HBW0 351 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 MYNNQ9NPC7 610 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 TBC1D23Q9NUY8 699 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 FAM120CQ9NX05 1096 aaKnown RBP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 PAQR5Q9NXK6 330 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-211ENST00000522802 OPTCQ9UBM4 332 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 ABCG2Q9UNQ0 655 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 USP22Q9UPT9 525 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 CHMP2BQ9UQN3 213 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 OR10H1Q9Y4A9 318 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 SLC25A15Q9Y619 301 aa5.48□□□□□ -1.53
VPS13B-211ENST00000522802 LOC105371242A0A075B767 164 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 IGLV3-32A0A0A0MS00 114 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 A0A1W2PRB8 838 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 SUPT3HB4E1H0 165 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 H0YIV9 168 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 K7EPI3 171 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 UBXN8O00124 270 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 RGS10O43665 173 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 SUPT3HO75486 399 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 SEMA3DO95025 777 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 PGM3O95394 542 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 UTS2O95399 124 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 STAMBPO95630 424 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 ANGPTL1O95841 491 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 PGCP20142 388 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 TNFSF4P23510 183 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 PRKAR1BP31321 381 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 RFX3P48380 749 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 ALDH9A1P49189 494 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 MAPK12P53778 367 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 SNRPD2P62316 118 aaKnown RBP5.47□□□□□ -1.53
VPS13B-211ENST00000522802 UBA52P62987 128 aaKnown RBP5.47□□□□□ -1.53
VPS13B-211ENST00000522802 PHEXP78562 749 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 FOXF1Q12946 379 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 CSTF3Q12996 717 aaKnown RBP5.47□□□□□ -1.53
VPS13B-211ENST00000522802 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 CDKL4Q5MAI5 379 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 CCNYL2Q5T2Q4 361 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 USP43Q70EL4 1123 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 FCRLAQ7L513 359 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 COMMD6Q7Z4G1 85 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 GLCCI1Q86VQ1 547 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 TMEM139Q8IV31 216 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 TEX9Q8N6V9 391 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 ZNF433Q8N7K0 673 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-211ENST00000522802 GATSQ8NAP1 163 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 OR7G2Q8NG99 324 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 ZNF675Q8TD23 568 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 OSTF1Q92882 214 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 KLHL15Q96M94 604 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 PSD2Q9BQI7 771 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 TSPY26PQ9H489 355 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 ALG9Q9H6U8 611 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 POPDC3Q9HBV1 291 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 MYOZ1Q9NP98 299 aaPredicted RBP5.47□□□□□ -1.53
VPS13B-211ENST00000522802 SDHAF3Q9NRP4 125 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 MED17Q9NVC6 651 aa5.47□□□□□ -1.53
VPS13B-211ENST00000522802 HIF1ANQ9NWT6 349 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms