RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 CHST2Q9Y4C5 530 aa18.24■□□□□ 0.51
SDCBP-209ENST00000522243 MAGED1Q9Y5V3 778 aaPredicted RBP18.24■□□□□ 0.51
SDCBP-209ENST00000522243 FLVCR1Q9Y5Y0 555 aa18.24■□□□□ 0.51
SDCBP-209ENST00000522243 USF3Q68DE3 2245 aa18.24■□□□□ 0.51
SDCBP-209ENST00000522243 TMEM247A6NEH6 219 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 FAM171A2A8MVW0 826 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 CLIC1O00299 241 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 POLR3GO15318 223 aaPredicted RBP18.23■□□□□ 0.51
SDCBP-209ENST00000522243 TMCC2O75069 709 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 AKR7A3O95154 331 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 IDUAP35475 653 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 STX1BP61266 288 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 LARS2Q15031 903 aaKnown RBP18.23■□□□□ 0.51
SDCBP-209ENST00000522243 RGNQ15493 299 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 OR7A5Q15622 319 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 OTUD3Q5T2D3 398 aaPredicted RBP18.23■□□□□ 0.51
SDCBP-209ENST00000522243 WBP2NLQ6ICG8 309 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 P2RY8Q86VZ1 359 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 TMEM99Q8N816 258 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 LRRC8CQ8TDW0 803 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 MAL2Q969L2 176 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 GTPBP3Q969Y2 492 aaKnown RBP18.23■□□□□ 0.51
SDCBP-209ENST00000522243 C7orf26Q96N11 449 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 TCF7L2Q9NQB0 619 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 TAS2R16Q9NYV7 291 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 CISD1Q9NZ45 108 aaKnown RBP18.23■□□□□ 0.51
SDCBP-209ENST00000522243 UPB1Q9UBR1 384 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 ZNF232Q9UNY5 417 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 ZFHX3Q15911 3703 aa18.23■□□□□ 0.51
SDCBP-209ENST00000522243 VPS13CQ709C8 3753 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 A0A0G2JPF8 293 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 HNRNPCL2B2RXH8 293 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 SHISA9B4DS77 424 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 HNRNPCL3B7ZW38 293 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 ABCD4O14678 606 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 HNRNPCL1O60812 293 aaKnown RBP18.22■□□□□ 0.51
SDCBP-209ENST00000522243 ITGA5P08648 1049 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 HNRNPCL4P0DMR1 293 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 NCF2P19878 526 aaPredicted RBP18.22■□□□□ 0.51
SDCBP-209ENST00000522243 PTNP21246 168 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 IDH3AP50213 366 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 ZNF83P51522 516 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 MAP2K6P52564 334 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 COPZ1P61923 177 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 SLC17A1Q14916 467 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 PGGHGQ32M88 737 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 TSPO2Q5TGU0 170 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 RNF220Q5VTB9 566 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 PAQR6Q6TCH4 344 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 SERPINA11Q86U17 422 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 PIAS4Q8N2W9 510 aaPredicted RBP18.22■□□□□ 0.51
SDCBP-209ENST00000522243 SPATA9Q9BWV2 254 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 C1QTNF6Q9BXI9 259 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 CACYBPQ9HB71 228 aaKnown RBP18.22■□□□□ 0.51
SDCBP-209ENST00000522243 SLC7A10Q9NS82 523 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 SLC9A8Q9Y2E8 581 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 SLC25A15Q9Y619 301 aa18.22■□□□□ 0.51
SDCBP-209ENST00000522243 LIPT2A6NK58 231 aa18.21■□□□□ 0.51
SDCBP-209ENST00000522243 OVOL3O00110 214 aa18.21■□□□□ 0.51
SDCBP-209ENST00000522243 FRS3O43559 492 aa18.21■□□□□ 0.51
SDCBP-209ENST00000522243 GPIP06744 558 aa18.21■□□□□ 0.51
SDCBP-209ENST00000522243 THBS1P07996 1170 aa18.21■□□□□ 0.51
SDCBP-209ENST00000522243 CDH11P55287 796 aa18.21■□□□□ 0.51
SDCBP-209ENST00000522243 HOXC5Q00444 222 aa18.21■□□□□ 0.51
SDCBP-209ENST00000522243 SPOCK1Q08629 439 aa18.21■□□□□ 0.51
SDCBP-209ENST00000522243 GABRA6Q16445 453 aa18.21■□□□□ 0.51
SDCBP-209ENST00000522243 ZNF311Q5JNZ3 666 aa18.21■□□□□ 0.51
SDCBP-209ENST00000522243 FUNDC1Q8IVP5 155 aa18.21■□□□□ 0.51
SDCBP-209ENST00000522243 TRMT61AQ96FX7 289 aaKnown RBP18.21■□□□□ 0.51
SDCBP-209ENST00000522243 ZNF385AQ96PM9 386 aaKnown RBP18.21■□□□□ 0.51
SDCBP-209ENST00000522243 ADPRHL2Q9NX46 363 aa18.21■□□□□ 0.51
SDCBP-209ENST00000522243 THUMPD1Q9NXG2 353 aaKnown RBP18.21■□□□□ 0.51
SDCBP-209ENST00000522243 SLC25A37Q9NYZ2 338 aa18.21■□□□□ 0.51
SDCBP-209ENST00000522243 SLAMF8Q9P0V8 285 aa18.21■□□□□ 0.51
SDCBP-209ENST00000522243 MALT1Q9UDY8 824 aa18.21■□□□□ 0.51
SDCBP-209ENST00000522243 NR5A2O00482 541 aa18.2■□□□□ 0.5
SDCBP-209ENST00000522243 HOXB9P17482 250 aaPredicted RBP18.2■□□□□ 0.5
SDCBP-209ENST00000522243 TNK1Q13470 666 aa18.2■□□□□ 0.5
SDCBP-209ENST00000522243 CLEC12BQ2HXU8 276 aa18.2■□□□□ 0.5
SDCBP-209ENST00000522243 TTMPQ5BVD1 217 aa18.2■□□□□ 0.5
SDCBP-209ENST00000522243 GPAT4Q86UL3 456 aa18.2■□□□□ 0.5
SDCBP-209ENST00000522243 GOLGA6L1Q8N7Z2 621 aa18.2■□□□□ 0.5
SDCBP-209ENST00000522243 ATP6V1G3Q96LB4 118 aa18.2■□□□□ 0.5
SDCBP-209ENST00000522243 MUS81Q96NY9 551 aa18.2■□□□□ 0.5
SDCBP-209ENST00000522243 TAPBPLQ9BX59 468 aa18.2■□□□□ 0.5
SDCBP-209ENST00000522243 RAD21L1Q9H4I0 556 aa18.2■□□□□ 0.5
SDCBP-209ENST00000522243 PARPBPQ9NWS1 579 aa18.2■□□□□ 0.5
SDCBP-209ENST00000522243 CCDC167Q9P0B6 97 aa18.2■□□□□ 0.5
SDCBP-209ENST00000522243 IFT52Q9Y366 437 aa18.2■□□□□ 0.5
SDCBP-209ENST00000522243 CADP27708 2225 aa18.2■□□□□ 0.5
SDCBP-209ENST00000522243 NF1P21359 2839 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 A0A096LPI6 279 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 A8MVM7 634 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 M0R1B8 84 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 NDUFS7O75251 213 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 TGDSO95455 350 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 CD8AP01732 235 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 AQP5P55064 265 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 FADDQ13158 208 aa18.19■□□□□ 0.5
SDCBP-209ENST00000522243 VEZF1Q14119 521 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms