RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 CHCHD10Q8WYQ3 142 aaPredicted RBP3.32□□□□□ -1.88
PTPN12-214ENST00000520947 OR1E3Q8WZA6 343 aa3.32□□□□□ -1.88
PTPN12-214ENST00000520947 ST8SIA1Q92185 356 aa3.32□□□□□ -1.88
PTPN12-214ENST00000520947 EFHD2Q96C19 240 aaPredicted RBP3.32□□□□□ -1.88
PTPN12-214ENST00000520947 COQ2Q96H96 371 aa3.32□□□□□ -1.88
PTPN12-214ENST00000520947 NPAS2Q99743 824 aa3.32□□□□□ -1.88
PTPN12-214ENST00000520947 SLC39A3Q9BRY0 314 aa3.32□□□□□ -1.88
PTPN12-214ENST00000520947 PKIBQ9C010 78 aa3.32□□□□□ -1.88
PTPN12-214ENST00000520947 HYPKQ9NX55 129 aa3.32□□□□□ -1.88
PTPN12-214ENST00000520947 CLEC4AQ9UMR7 237 aa3.32□□□□□ -1.88
PTPN12-214ENST00000520947 PRPF19Q9UMS4 504 aaKnown RBP3.32□□□□□ -1.88
PTPN12-214ENST00000520947 IFT52Q9Y366 437 aa3.32□□□□□ -1.88
PTPN12-214ENST00000520947 THSD7BQ9C0I4 1608 aa3.32□□□□□ -1.88
PTPN12-214ENST00000520947 COL16A1Q07092 1604 aaPredicted RBP3.31□□□□□ -1.88
PTPN12-214ENST00000520947 NSD2O96028 1365 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 SYNRGQ9UMZ2 1314 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 IGKV1D-8A0A087WSZ0 117 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 TRAV26-1A0A087WT03 109 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 A0A0J9YXY3 114 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 A0A0U1RQS6 177 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 DCTN6O00399 190 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 ZNF208O43345 1280 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 B4GALT2O60909 372 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 MMP23AO75900 390 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 SCGNO76038 276 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 LGI1O95970 557 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 CAPN1P07384 714 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 ANXA13P27216 316 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 TAGLN2P37802 199 aaKnown RBP3.31□□□□□ -1.88
PTPN12-214ENST00000520947 PEX19P40855 299 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 GRIA1P42261 906 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 EFNB2P52799 333 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 ACTR3P61158 418 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 GNB2P62879 340 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 CCNA1P78396 465 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 CAPRIN1Q14444 709 aaKnown RBP3.31□□□□□ -1.88
PTPN12-214ENST00000520947 ARL6IP1Q15041 203 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 SLC15A2Q16348 729 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 SFT2D3Q587I9 215 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 KLF17Q5JT82 389 aaPredicted RBP3.31□□□□□ -1.88
PTPN12-214ENST00000520947 EOGTQ5NDL2 527 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 C1orf220Q5T0J3 134 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 OR4F3Q6IEY1 312 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 IL34Q6ZMJ4 242 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 Q6ZPB1 254 aaPredicted RBP3.31□□□□□ -1.88
PTPN12-214ENST00000520947 CCDC50Q8IVM0 306 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 OR5D13Q8NGL4 314 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 MAIP1Q8WWC4 291 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 HTR3CQ8WXA8 447 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 FBXO32Q969P5 355 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 SLC38A2Q96QD8 506 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 ARHGDIGQ99819 225 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 EBF4Q9BQW3 602 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 CCDC77Q9BR77 488 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 TMEM43Q9BTV4 400 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 ZDHHC11Q9H8X9 412 aa3.31□□□□□ -1.88
PTPN12-214ENST00000520947 CAB39Q9Y376 341 aaPredicted RBP3.31□□□□□ -1.88
PTPN12-214ENST00000520947 PNPLA6Q8IY17 1366 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 IDSB3KWA1 339 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 EMC8O43402 210 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 ATP5LO75964 103 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 DIRAS1O95057 198 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 STAMBPO95630 424 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 AP2A1O95782 977 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 ACTL6AO96019 429 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 KRT6AP02538 564 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 HSMCR30P0CW71 290 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 POU2F1P14859 743 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 NPR2P20594 1047 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 FUT3P21217 361 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 CCT3P49368 545 aaKnown RBP3.3□□□□□ -1.88
PTPN12-214ENST00000520947 CAV2P51636 162 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 RPL23AP62750 156 aaKnown RBP3.3□□□□□ -1.88
PTPN12-214ENST00000520947 CSNK1G2P78368 415 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 FGL1Q08830 312 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 KLRB1Q12918 225 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 IL17AQ16552 155 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 DPYSL2Q16555 572 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 CCDC14Q49A88 953 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 C2orf83Q53S99 150 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 PDZK1Q5T2W1 519 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 OR2G6Q5TZ20 316 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 OTPQ5XKR4 325 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 MFSD9Q8NBP5 474 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 DCUN1D4Q92564 292 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 IMMP1LQ96LU5 166 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 NCOR1P1Q9H4R4 102 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 FN3KRPQ9HA64 309 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 TREM2Q9NZC2 230 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 CDH9Q9ULB4 789 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 NAP1L2Q9ULW6 460 aaPredicted RBP3.3□□□□□ -1.88
PTPN12-214ENST00000520947 TMED5Q9Y3A6 229 aa3.3□□□□□ -1.88
PTPN12-214ENST00000520947 RPAP1Q9BWH6 1393 aaPredicted RBP3.29□□□□□ -1.88
PTPN12-214ENST00000520947 FAM47DPA6NHR8 397 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 HCRTR1O43613 425 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 PRKAB2O43741 272 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 KLHL41O60662 606 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 ZNF780AO75290 641 aaPredicted RBP3.29□□□□□ -1.88
PTPN12-214ENST00000520947 CIB2O75838 187 aa3.29□□□□□ -1.88
PTPN12-214ENST00000520947 CCDC130P13994 396 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms