RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 ARPC3O15145 178 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 HCRTR1O43613 425 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 SSX4O60224 188 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 RFPL3O75679 317 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 GATBO75879 557 aaKnown RBP8.65□□□□□ -1.02
SUB1-209ENST00000511615 ARL6IP5O75915 188 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 NCR1O76036 304 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 GIMD1P0DJR0 217 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 DHPSP49366 369 aaPredicted RBP8.65□□□□□ -1.02
SUB1-209ENST00000511615 DIO1P49895 249 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 EPHA4P54764 986 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 MAT1AQ00266 395 aaKnown RBP8.65□□□□□ -1.02
SUB1-209ENST00000511615 SLC3A1Q07837 685 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 SRSF5Q13243 272 aaKnown RBP8.65□□□□□ -1.02
SUB1-209ENST00000511615 IL10RAQ13651 578 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 SHBQ15464 509 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 ZFP69Q49AA0 526 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 ZNF362Q5T0B9 420 aaPredicted RBP8.65□□□□□ -1.02
SUB1-209ENST00000511615 VASNQ6EMK4 673 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 WBP2NLQ6ICG8 309 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 RPL22L1Q6P5R6 122 aaKnown RBP8.65□□□□□ -1.02
SUB1-209ENST00000511615 KIRREL2Q6UWL6 708 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 KANSL1Q7Z3B3 1105 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 SLC35F2Q8IXU6 374 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 OR51Q1Q8NH59 317 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 C16orf52Q8NHV5 167 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 HAVCR2Q8TDQ0 301 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 SNX18Q96RF0 628 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 ELF4Q99607 663 aaPredicted RBP8.65□□□□□ -1.02
SUB1-209ENST00000511615 TMEM43Q9BTV4 400 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 RAB33BQ9H082 229 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.65□□□□□ -1.028e-7■■□□□ 13.7
SUB1-209ENST00000511615 UBQLN4Q9NRR5 601 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 LRIT1Q9P2V4 623 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 RABL2AQ9UBK7 228 aaPredicted RBP8.65□□□□□ -1.02
SUB1-209ENST00000511615 EXTL2Q9UBQ6 330 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 RABL2BQ9UNT1 228 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 SPAG17Q6Q759 2223 aa8.65□□□□□ -1.02
SUB1-209ENST00000511615 ARHGEF17Q96PE2 2063 aaPredicted RBP8.65□□□□□ -1.03
SUB1-209ENST00000511615 TRAV1-2A0A0B4J238 106 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 FAM240BA0A1B0GVZ2 78 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 FITM1A5D6W6 292 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 ELOA3DA6NLF2 546 aaPredicted RBP8.65□□□□□ -1.03
SUB1-209ENST00000511615 SCDO00767 359 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 IMPA2O14732 288 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 TFECO14948 347 aaPredicted RBP8.65□□□□□ -1.03
SUB1-209ENST00000511615 PLA2G10O15496 165 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 OGG1O15527 345 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 ORC5O43913 435 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 TMEM127O75204 238 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 CT45A8P0DMV1 189 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 CT45A9P0DMV2 189 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 NPR2P20594 1047 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 SHC1P29353 583 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 RBMS1P29558 406 aaKnown RBP8.65□□□□□ -1.03
SUB1-209ENST00000511615 PYCR1P32322 319 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 RORAP35398 523 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 GABRA4P48169 554 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 ARRB1P49407 418 aaPredicted RBP8.65□□□□□ -1.03
SUB1-209ENST00000511615 ARL4DP49703 201 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 DCAF7P61962 342 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 BTG2P78543 158 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 PITPNAQ00169 270 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 ERV3-1Q14264 604 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 ANGPT1Q15389 498 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 ELOA3BQ3SY89 546 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 CCDC58Q4VC31 144 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 ACSM3Q53FZ2 586 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 KLHL26Q53HC5 615 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 CT45A2Q5DJT8 189 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 ATAD3CQ5T2N8 411 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 FCRLBQ6BAA4 426 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 DMKNQ6E0U4 476 aaPredicted RBP8.65□□□□□ -1.03
SUB1-209ENST00000511615 FAAH2Q6GMR7 532 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 PYHIN1Q6K0P9 492 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 SLC23A3Q6PIS1 610 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 BAIAP2L2Q6UXY1 529 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 CARFQ8N187 725 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 ZNF615Q8N8J6 731 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 CYB561A3Q8NBI2 242 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 DUSP18Q8NEJ0 188 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 ELOA3Q8NG57 546 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 OR6F1Q8NGZ6 308 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 OR4K13Q8NH42 304 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 OR14A16Q8NHC5 309 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 SNX33Q8WV41 574 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 SLC46A1Q96NT5 459 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 DCLRE1CQ96SD1 692 aaKnown RBP8.65□□□□□ -1.03
SUB1-209ENST00000511615 TIMP4Q99727 224 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 MFRPQ9BY79 579 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 HDHD2Q9H0R4 259 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 MMP28Q9H239 520 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 EXOSC3Q9NQT5 275 aaKnown RBP8.65□□□□□ -1.03
SUB1-209ENST00000511615 ENAMQ9NRM1 1142 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 CYSLTR2Q9NS75 346 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 ABRACLQ9P1F3 81 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 GMEB2Q9UKD1 530 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 POU2F3Q9UKI9 436 aa8.65□□□□□ -1.03
SUB1-209ENST00000511615 SIRT4Q9Y6E7 314 aaPredicted RBP8.65□□□□□ -1.03
SUB1-209ENST00000511615 CACNA1HO95180 2353 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms