RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 PSMC3IPQ9P2W1 217 aaPredicted RBP3.57□□□□□ -1.84
MBD4-209ENST00000511009 UBQLN1Q9UMX0 589 aaKnown RBP3.57□□□□□ -1.84
MBD4-209ENST00000511009 N6AMT1Q9Y5N5 214 aa3.57□□□□□ -1.84
MBD4-209ENST00000511009 IGLV8-61A0A075B6I0 122 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 A0A1B0GU03 582 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 SMCO3A2RU48 225 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 CDX4O14627 284 aaPredicted RBP3.56□□□□□ -1.84
MBD4-209ENST00000511009 LSM1O15116 133 aaKnown RBP3.56□□□□□ -1.84
MBD4-209ENST00000511009 MMP1P03956 469 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 IGLL1P15814 213 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 GALP22466 123 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 RFC4P35249 363 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 SYKP43405 635 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 P2RY4P51582 365 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 LMO4P61968 165 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 RPS8P62241 208 aaKnown RBP3.56□□□□□ -1.84
MBD4-209ENST00000511009 VGLL4Q14135 290 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 GRB7Q14451 532 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 LRRC36Q1X8D7 754 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 C15orf32Q32M92 178 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 BCL7AQ4VC05 210 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 SBK1Q52WX2 424 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 OR2B11Q5JQS5 317 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 C19orf35Q6ZS72 473 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 HPS6Q86YV9 775 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 APOBEC3FQ8IUX4 373 aaKnown RBP3.56□□□□□ -1.84
MBD4-209ENST00000511009 FTMTQ8N4E7 242 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 BBOF1Q8ND07 529 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 KLHL30-AS1Q8NEE0 82 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 ANKRD49Q8WVL7 239 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 GTSF1Q8WW33 167 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 FGF11Q92914 225 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 PLEKHA8Q96JA3 519 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 C12orf42Q96LP6 360 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 TSNARE1Q96NA8 513 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 CNN2Q99439 309 aaKnown RBP3.56□□□□□ -1.84
MBD4-209ENST00000511009 KIR2DL4Q99706 377 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 KLHDC3Q9BQ90 382 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 CNPY3Q9BT09 278 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 Q9H3A6 140 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 HOXC10Q9NYD6 342 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 APOBEC3BQ9UH17 382 aaKnown RBP3.56□□□□□ -1.84
MBD4-209ENST00000511009 KLHL21Q9UJP4 597 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 STAP1Q9ULZ2 295 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 KCNIP3Q9Y2W7 256 aa3.56□□□□□ -1.84
MBD4-209ENST00000511009 TTC21BQ7Z4L5 1316 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 DCTN6O00399 190 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 PSTPIP1O43586 416 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 LGI1O95970 557 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 CST1P01037 141 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 THY1P04216 161 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 P04436 131 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 PABPC4LP0CB38 370 aaKnown RBP3.55□□□□□ -1.84
MBD4-209ENST00000511009 ATP6V1B2P21281 511 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 HNRNPH3P31942 346 aaKnown RBP3.55□□□□□ -1.84
MBD4-209ENST00000511009 SHMT2P34897 504 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 OR3A4PP47883 348 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 SLC26A2P50443 739 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 GPM6AP51674 278 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 PLP1P60201 277 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 RPS14P62263 151 aaKnown RBP3.55□□□□□ -1.84
MBD4-209ENST00000511009 SCRN3Q0VDG4 424 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 OR5I1Q13606 314 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 PRR4Q16378 134 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 MICBQ29980 383 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 CARD16Q5EG05 197 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 XKR7Q5GH72 579 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 RAET1LQ5VY80 246 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 CGB2Q6NT52 195 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 WDR74Q6RFH5 385 aaPredicted RBP3.55□□□□□ -1.84
MBD4-209ENST00000511009 CXCL17Q6UXB2 119 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 CENPQQ7L2Z9 268 aaPredicted RBP3.55□□□□□ -1.84
MBD4-209ENST00000511009 ERI1Q8IV48 349 aaKnown RBP3.55□□□□□ -1.84
MBD4-209ENST00000511009 ACOT4Q8N9L9 421 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 OR4K14Q8NGD5 310 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 OR13F1Q8NGS4 319 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 OR9A1PQ8NGU1 263 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 FAM110BQ8TC76 370 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 DNAJA4Q8WW22 397 aaPredicted RBP3.55□□□□□ -1.84
MBD4-209ENST00000511009 STMN2Q93045 179 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 SLC25A38Q96DW6 304 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 C19orf24Q9BVV8 132 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 NCOR1P1Q9H4R4 102 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 NARFLQ9H6Q4 476 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 PTGES2Q9H7Z7 377 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 NIPAL2Q9H841 368 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 FOLH1BQ9HBA9 442 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 NEK6Q9HC98 313 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 DCDC2Q9UHG0 476 aa3.55□□□□□ -1.84
MBD4-209ENST00000511009 SH3TC1Q8TE82 1336 aa3.54□□□□□ -1.84
MBD4-209ENST00000511009 IGHV1OR15-1A0A075B7D0 117 aa3.54□□□□□ -1.84
MBD4-209ENST00000511009 IGHV7-81A0A0B4J1V7 117 aa3.54□□□□□ -1.84
MBD4-209ENST00000511009 TUBAL3A6NHL2 446 aa3.54□□□□□ -1.84
MBD4-209ENST00000511009 LRRIQ4A6NIV6 560 aa3.54□□□□□ -1.84
MBD4-209ENST00000511009 OR5B21A6NL26 309 aa3.54□□□□□ -1.84
MBD4-209ENST00000511009 TCP11X1B4DZS4 312 aa3.54□□□□□ -1.84
MBD4-209ENST00000511009 HSD17B6O14756 317 aa3.54□□□□□ -1.84
MBD4-209ENST00000511009 MBTPS2O43462 519 aa3.54□□□□□ -1.84
MBD4-209ENST00000511009 LYPLA1O75608 230 aaPredicted RBP3.54□□□□□ -1.84
MBD4-209ENST00000511009 STAMBPO95630 424 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms