RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 ITGA5P08648 1049 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 NME1P15531 152 aaKnown RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 NQO2P16083 231 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 GNB3P16520 340 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 CRISP2P16562 243 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ZNF28P17035 718 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 IL1RNP18510 177 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 MIPP30301 263 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 HTR1FP30939 366 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ARRB1P49407 418 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 CPT1AP50416 773 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 DSC1Q08554 894 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 CDK5R2Q13319 367 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 LGALSLQ3ZCW2 172 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 PDLIM3Q53GG5 364 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 MFSD14BQ5SR56 506 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ZNF468Q5VIY5 522 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 EEF1DP3Q658K8 133 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 NCR3LG1Q68D85 454 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 MORN3Q6PF18 240 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 SSX8Q7RTT4 187 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 MAMDC2Q7Z304 686 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 SPRED1Q7Z699 444 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 TSEN54Q7Z6J9 526 aaKnown RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 LRRTM3Q86VH5 581 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 BPIFA4PQ86YQ2 179 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 MTMR14Q8NCE2 650 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 OR10P1Q8NGE3 313 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 OR4C16Q8NGL9 310 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 OR10D4PQ8NGN7 298 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 OR2T27Q8NH04 317 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 RASGRP4Q8TDF6 673 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 HMGB4Q8WW32 186 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 RLN3Q8WXF3 142 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 APH1AQ96BI3 265 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 TBC1D20Q96BZ9 403 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 HSH2DQ96JZ2 352 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 NECTIN4Q96NY8 510 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 CPPED1Q9BRF8 314 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 FDXACB1Q9BRP7 624 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 PECRQ9BY49 303 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 METTL17Q9H7H0 456 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 NRIP3Q9NQ35 241 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 SERTAD4Q9NUC0 356 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 AK3Q9UIJ7 227 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 NSG2Q9Y328 171 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 LIPGQ9Y5X9 500 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 PSAT1Q9Y617 370 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 DUXBA0A1W2PPF3 345 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 TCRBV3S1A0A5B6 114 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 PRAMEF27A3QJZ7 478 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 PRAMEF25A6NGN4 478 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 SERPINE3A8MV23 424 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 USP17L10C9JJH3 530 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 FTCDNL1E5RQL4 147 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 GABARAPH6UMI1 98 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 J3QLW9 94 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 INSIG1O15503 277 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 MSCO60682 206 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 PRAMEF4O60810 478 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 FZD7O75084 574 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 HPP00738 406 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 NRASP01111 189 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 HRASP01112 189 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 KRASP01116 189 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 CHRM2P08172 466 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 RRASP10301 218 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 LAMP1P11279 417 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 COL6A1P12109 1028 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 SLC25A6P12236 298 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 FOLR1P15328 257 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ZNF19P17023 458 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 DIO1P49895 249 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 GNG4P50150 75 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 MAXP61244 160 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 DHODHQ02127 395 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 ZNF90Q03938 601 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 FZD2Q14332 565 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 SF3B4Q15427 424 aaKnown RBP eCLIP3.35□□□□□ -1.87
USP53-205ENST00000509769 IAH1Q2TAA2 248 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 GLYR1Q49A26 553 aaPredicted RBP3.35□□□□□ -1.87
USP53-205ENST00000509769 CYBRD1Q53TN4 286 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 RTP2Q5QGT7 225 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 GLYATL3Q5SZD4 288 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 PRAMEF9Q5VWM5 478 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 PLCXD3Q63HM9 321 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 AMMECR1LQ6DCA0 310 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 VITQ6UXI7 678 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 TMEM64Q6YI46 380 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 Q6ZN92 141 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 LGI3Q8N145 548 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 GPR137CQ8N3F9 429 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 OR5P2Q8WZ92 322 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 FAM136AQ96C01 138 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 SGCZQ96LD1 299 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 AMDHD1Q96NU7 426 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 CLSTN3Q9BQT9 956 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 POLD4Q9HCU8 107 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 AAASQ9NRG9 546 aa3.35□□□□□ -1.87
USP53-205ENST00000509769 THSD1Q9NS62 852 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms