RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 PDZD2O15018 2839 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 MAST4O15021 2626 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 SCAMP2O15127 329 aaKnown RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 TBX19O60806 448 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 COQ9O75208 318 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 SNNO75324 88 aaPredicted RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 CBR3O75828 277 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 TOXO94900 526 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 KCNK2O95069 426 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 PSMG1O95456 288 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 CLDN14O95500 239 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 HMGN2P05204 90 aaKnown RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 HPNP05981 417 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 ALOX5P09917 674 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 NPIPA8P0DM63 369 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 COX6B1P14854 86 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 DPP4P27487 766 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 EPHA3P29320 983 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 EVI2BP34910 448 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 NUP214P35658 2090 aaPredicted RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 MAP3K8P41279 467 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 FRKP42685 505 aaPredicted RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 PNLIPRP2P54317 469 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 TPD52P55327 224 aaPredicted RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 DLX5P56178 289 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 TPTEP56180 551 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 CLDN8P56748 225 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 B3GALT5-AS1P59052 145 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 UFM1P61960 85 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 HBA1P69905 142 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 NOTCH2Q04721 2471 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 CRYZQ08257 329 aaKnown RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 SNTA1Q13424 505 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 EFR3AQ14156 821 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 LASP1Q14847 261 aaKnown RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 ZNHIT3Q15649 155 aaPredicted RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 DECR1Q16698 335 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 NDUFAF6Q330K2 333 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 KRTAP27-1Q3LI81 207 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 C1orf185Q5T7R7 199 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 MFSD12Q6NUT3 480 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 ARSKQ6UWY0 536 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 B3GNT6Q6ZMB0 384 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 MEX3BQ6ZN04 569 aaKnown RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 C9orf47Q6ZRZ4 202 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 RNF165Q6ZSG1 346 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 Q6ZWC4 215 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 C6orf120Q7Z4R8 191 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 R3HCC1LQ7Z5L2 792 aaKnown RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 HMGN2P46Q86SG4 172 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 NAV2Q8IVL1 2488 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 MCEMP1Q8IX19 187 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 UBQLNLQ8IYU4 475 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 OR2C3Q8N628 320 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 OR2M3Q8NG83 312 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 OR4K17Q8NGC6 315 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 LRTOMTQ8WZ04 291 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 OR5P2Q8WZ92 322 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 MTERF3Q96E29 417 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 ARSGQ96EG1 525 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 FAM120BQ96EK7 910 aaKnown RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 GIMAP5Q96F15 307 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 SH3YL1Q96HL8 342 aaPredicted RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 TMEM41AQ96HV5 264 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 TEX37Q96LM6 180 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 PRPF18Q99633 342 aaKnown RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 NPAS1Q99742 590 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 TUBA1CQ9BQE3 449 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 INPP5KQ9BT40 448 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 LMF2Q9BU23 707 aaKnown RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 TBL1XR1Q9BZK7 514 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 DPY30Q9C005 99 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 STMN4Q9H169 189 aaPredicted RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 HIPK2Q9H2X6 1198 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 PCNX3Q9H6A9 2034 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 Q9N2J8 555 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 KCNJ16Q9NPI9 418 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 ACSS1Q9NUB1 689 aaPredicted RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 ZCCHC3Q9NUD5 404 aaKnown RBP4.08□□□□□ -1.76
NUP54-206ENST00000508465 CELSR1Q9NYQ6 3014 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 NKIRAS1Q9NYS0 192 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 COQ3Q9NZJ6 369 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 UNC79Q9P2D8 2635 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 B4GALT7Q9UBV7 327 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 DKKL1Q9UK85 242 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 CORO2BQ9UQ03 480 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 ZNF337Q9Y3M9 751 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 SNX13Q9Y5W8 968 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 PRSS29PA6NIE9 313 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 M0QYG6 137 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 GTPBP1O00178 669 aaKnown RBP4.07□□□□□ -1.76
NUP54-206ENST00000508465 ANKRD28O15084 1053 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 HNRNPRO43390 633 aaKnown RBP4.07□□□□□ -1.76
NUP54-206ENST00000508465 FCMRO60667 390 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 WDR1O75083 606 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 NKX2-2O95096 273 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 OXSR1O95747 527 aaPredicted RBP4.07□□□□□ -1.76
NUP54-206ENST00000508465 ANGPTL1O95841 491 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 EPPINO95925 133 aa4.07□□□□□ -1.76
NUP54-206ENST00000508465 HOXD4P09016 255 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms