RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 KLRG1Q96E93 195 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 RCC1LQ96I51 464 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 APOBEC3GQ9HC16 384 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 SOHLH2Q9NX45 425 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 COMMD3Q9UBI1 195 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 CACFD1Q9UGQ2 172 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 PIN4Q9Y237 131 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 FNDC3AQ9Y2H6 1198 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 COLEC10Q9Y6Z7 277 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 BTAF1O14981 1849 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 XIRP1Q702N8 1843 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 MEGF6O75095 1541 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 CPED1A4D0V7 1026 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 SEPT4O43236 478 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 GSTZ1O43708 216 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 EDIL3O43854 480 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 SLC25A12O75746 678 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 DFFBO76075 338 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 CALCAP01258 141 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 IGHEP01854 428 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 CD5P06127 495 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 ACPPP15309 386 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 CCNOP22674 350 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 ARL4AP40617 200 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 CRISP1P54107 249 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 DAOAP59103 153 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 TAS2R39P59534 338 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 PSMA6P60900 246 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 ZNF543Q08ER8 600 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 RBBP4Q09028 425 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 SLAQ13239 276 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 MRPL58Q14197 206 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 LASP1Q14847 261 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 HERPUD1Q15011 391 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 CARD16Q5EG05 197 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 C1orf194Q5T5A4 169 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 IL27RAQ6UWB1 636 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 NUFIP2Q7Z417 695 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 CCDC117Q8IWD4 279 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 SCN4BQ8IWT1 228 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 SYNPOQ8N3V7 929 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 ZNF610Q8N9Z0 462 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 OR52B6Q8NGF0 335 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 ARNTL2Q8WYA1 636 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 TIFAQ96CG3 184 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 CTHRC1Q96CG8 243 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 IGSF21Q96ID5 467 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 OR2M4Q96R27 311 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 VPS25Q9BRG1 176 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 AKTIPQ9H8T0 292 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 TMEM27Q9HBJ8 222 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 TAS2R5Q9NYW4 299 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 SUSD2Q9UGT4 822 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 ZNF346Q9UL40 294 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 NEU3Q9UQ49 428 aa10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 SPIN1Q9Y657 262 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 CFAP20Q9Y6A4 193 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-210ENST00000508216 TLR4O00206 839 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 CDIPTO14735 213 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 CTDSPLO15194 276 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 SYPP08247 313 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 CD8BP10966 210 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 GLRA1P23415 457 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 SCNN1AP37088 669 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 PSMB10P40306 273 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 CHRNA4P43681 627 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 CLDN12P56749 244 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 IRF9Q00978 393 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 UBE2V1Q13404 147 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 IL10RAQ13651 578 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 C1DQ13901 141 aaKnown RBP10□□□□□ -0.81
PDLIM5-210ENST00000508216 PAGE3Q5JUK9 113 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 SLC35D2Q76EJ3 337 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 NDUFAF7Q7L592 441 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 TMPRSS7Q7RTY8 843 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 GOLGA7Q7Z5G4 137 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 GRASPQ7Z6J2 395 aaPredicted RBP10□□□□□ -0.81
PDLIM5-210ENST00000508216 CATSPERDQ86XM0 798 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 JAGN1Q8N5M9 183 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 ZNF614Q8N883 585 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 B3GNT7Q8NFL0 401 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 OR2T12Q8NG77 320 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 OR51S1Q8NGJ8 323 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 SNIP1Q8TAD8 396 aaKnown RBP10□□□□□ -0.81
PDLIM5-210ENST00000508216 CSGALNACT1Q8TDX6 532 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 SLC25A28Q96A46 364 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 PYURFQ96I23 114 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 WDR92Q96MX6 357 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 CDK15Q96Q40 435 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 AARSD1Q9BTE6 412 aaKnown RBP10□□□□□ -0.81
PDLIM5-210ENST00000508216 LGR4Q9BXB1 951 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 LAT2Q9GZY6 243 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 IPPKQ9H8X2 491 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 AIG1Q9NVV5 245 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 AURKAIP1Q9NWT8 199 aaPredicted RBP10□□□□□ -0.81
PDLIM5-210ENST00000508216 CHRNA9Q9UGM1 479 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 CD84Q9UIB8 345 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 WIF1Q9Y5W5 379 aa10□□□□□ -0.81
PDLIM5-210ENST00000508216 TRAV39A0A0B4J263 110 aa9.99□□□□□ -0.81
PDLIM5-210ENST00000508216 A0A1B0GV72 72 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms