RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 MT-CO3P00414 261 aa20.01■□□□□ 0.79
PTPN13-205ENST00000502971 RAB40ALP0C0E4 278 aa20.01■□□□□ 0.79
PTPN13-205ENST00000502971 ASAH2BP0C7U1 165 aa20.01■□□□□ 0.79
PTPN13-205ENST00000502971 PAICSP22234 425 aaKnown RBP20.01■□□□□ 0.79
PTPN13-205ENST00000502971 GADD45AP24522 165 aa20.01■□□□□ 0.79
PTPN13-205ENST00000502971 RPL4P36578 427 aaKnown RBP20.01■□□□□ 0.79
PTPN13-205ENST00000502971 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.01■□□□□ 0.79
PTPN13-205ENST00000502971 EIF3IQ13347 325 aaKnown RBP20.01■□□□□ 0.79
PTPN13-205ENST00000502971 DYNC1I2Q13409 638 aaKnown RBP20.01■□□□□ 0.79
PTPN13-205ENST00000502971 NTRK2Q16620 822 aa20.01■□□□□ 0.79
PTPN13-205ENST00000502971 TSTQ16762 297 aaKnown RBP20.01■□□□□ 0.79
PTPN13-205ENST00000502971 SLC37A3Q8NCC5 494 aa20.01■□□□□ 0.79
PTPN13-205ENST00000502971 PSD4Q8NDX1 1056 aa20.01■□□□□ 0.79
PTPN13-205ENST00000502971 PTP4A1Q93096 173 aa20.01■□□□□ 0.79
PTPN13-205ENST00000502971 NRIP3Q9NQ35 241 aa20.01■□□□□ 0.79
PTPN13-205ENST00000502971 PCDHGA3Q9Y5H0 932 aa20.01■□□□□ 0.79
PTPN13-205ENST00000502971 SLC22A31A6NKX4 558 aa20■□□□□ 0.79
PTPN13-205ENST00000502971 VBP1P61758 197 aa20■□□□□ 0.79
PTPN13-205ENST00000502971 LSM3P62310 102 aaKnown RBP20■□□□□ 0.79
PTPN13-205ENST00000502971 MLLT11Q13015 90 aaPredicted RBP20■□□□□ 0.79
PTPN13-205ENST00000502971 NDUFAF7Q7L592 441 aa20■□□□□ 0.79
PTPN13-205ENST00000502971 NACC2Q96BF6 587 aa20■□□□□ 0.79
PTPN13-205ENST00000502971 KTI12Q96EK9 354 aaPredicted RBP20■□□□□ 0.79
PTPN13-205ENST00000502971 RASL10BQ96S79 203 aa20■□□□□ 0.79
PTPN13-205ENST00000502971 NDEL1Q9GZM8 345 aa20■□□□□ 0.79
PTPN13-205ENST00000502971 FKRPQ9H9S5 495 aa20■□□□□ 0.79
PTPN13-205ENST00000502971 SDHAF3Q9NRP4 125 aa20■□□□□ 0.79
PTPN13-205ENST00000502971 ZNF229Q9UJW7 825 aa20■□□□□ 0.79
PTPN13-205ENST00000502971 SLC6A5Q9Y345 797 aa20■□□□□ 0.79
PTPN13-205ENST00000502971 IER3IP1Q9Y5U9 82 aa20■□□□□ 0.79
PTPN13-205ENST00000502971 RIF1Q5UIP0 2472 aaKnown RBP19.99■□□□□ 0.79
PTPN13-205ENST00000502971 TRAV36DV7A0A075B6V5 113 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 CCDC187A0A096LP49 1063 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 SLC25A12O75746 678 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 APOL3O95236 402 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 IGHA1P01876 353 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 MSX1P28360 303 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 ATP6V1E1P36543 226 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 CLK1P49759 484 aaKnown RBP19.99■□□□□ 0.79
PTPN13-205ENST00000502971 WNT4P56705 351 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 CRMP1Q14194 572 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 TRIP6Q15654 476 aaKnown RBP19.99■□□□□ 0.79
PTPN13-205ENST00000502971 TIMM50Q3ZCQ8 353 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 PAQR6Q6TCH4 344 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 OR11G2Q8NGC1 345 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 ST8SIA1Q92185 356 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 RPL3LQ92901 407 aaKnown RBP19.99■□□□□ 0.79
PTPN13-205ENST00000502971 SPACA9Q96E40 222 aaPredicted RBP19.99■□□□□ 0.79
PTPN13-205ENST00000502971 MOGAT1Q96PD6 335 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 SPRY4Q9C004 299 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 MED20Q9H944 212 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 ISYNA1Q9NPH2 558 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 TNFRSF10DQ9UBN6 386 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 ZFHX2Q9C0A1 2572 aaPredicted RBP19.99■□□□□ 0.79
PTPN13-205ENST00000502971 KIF26BQ2KJY2 2108 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 TMED7-TICAM2A0A0A6YYA0 188 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 DKK1O94907 266 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 UGT2B10P36537 528 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 DLX5P56178 289 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 NCS1P62166 190 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 LTBQ06643 244 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 FCRLBQ6BAA4 426 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 C5orf46Q6UWT4 87 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 SHFQ7M4L6 423 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 OR4F15Q8NGB8 312 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 OR52E2Q8NGJ4 325 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 HCAR1Q9BXC0 346 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 RYDENQ9NUL5 291 aaKnown RBP19.99■□□□□ 0.79
PTPN13-205ENST00000502971 KLRF1Q9NZS2 232 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 TMED7Q9Y3B3 224 aa19.99■□□□□ 0.79
PTPN13-205ENST00000502971 NSG1A0A0A6YYJ2 146 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 J3QRE1 110 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 SUSD5O60279 629 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 HIST1H2ABP04908 130 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 TSPAN19P0C672 248 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 LIMS3P0CW19 117 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 LIMS4P0CW20 117 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 APEHP13798 732 aaKnown RBP19.98■□□□□ 0.79
PTPN13-205ENST00000502971 HIST1H1CP16403 213 aaKnown RBP19.98■□□□□ 0.79
PTPN13-205ENST00000502971 SLC2A5P22732 501 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 DOC2BQ14184 412 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 HIST3H2AQ7L7L0 130 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 IGFN1Q86VF2 1251 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 ATCAYQ86WG3 371 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 ADGRG3Q86Y34 549 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 LRRC75AQ8NAA5 344 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 STK35Q8TDR2 534 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 HIST1H2ACQ93077 130 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 TAAR8Q969N4 342 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 TEAD3Q99594 435 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 TOR4AQ9NXH8 423 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 HAO2Q9NYQ3 351 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 TCFL5Q9UL49 500 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 ZNF292O60281 2723 aa19.98■□□□□ 0.79
PTPN13-205ENST00000502971 IGLV3-32A0A0A0MS00 114 aa19.97■□□□□ 0.79
PTPN13-205ENST00000502971 CCDC182A6NF36 153 aa19.97■□□□□ 0.79
PTPN13-205ENST00000502971 A8MVM7 634 aa19.97■□□□□ 0.79
PTPN13-205ENST00000502971 BLOC1S5-TXNDC5H3BN57 136 aa19.97■□□□□ 0.79
PTPN13-205ENST00000502971 IMPA2O14732 288 aa19.97■□□□□ 0.79
PTPN13-205ENST00000502971 MT-ATP6P00846 226 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms