RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 FANCMQ8IYD8 2048 aa7.65□□□□□ -1.19
USP54-215ENST00000497106 SULT2B1O00204 365 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 INMTO95050 263 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 CD36P16671 472 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 GSTT1P30711 240 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 ARMCX4Q5H9R4 360 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 SLC35F1Q5T1Q4 408 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 TMEM236Q5W0B7 351 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 LEG1Q6P5S2 330 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 SPARTQ8N0X7 666 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 OR11G2Q8NGC1 345 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 RNF31Q96EP0 1072 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 LDAHQ9H6V9 325 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 CMC2Q9NRP2 79 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 RHBDL2Q9NX52 303 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 PAQR5Q9NXK6 330 aaPredicted RBP7.64□□□□□ -1.19
USP54-215ENST00000497106 HRKO00198 91 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 PIP5K1CO60331 668 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 HLA-DPB1P04440 258 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 OCM2P0CE71 109 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 OCMP0CE72 109 aaPredicted RBP7.64□□□□□ -1.19
USP54-215ENST00000497106 GDF1P27539 372 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 ZNF84P51523 738 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 MLF1P58340 268 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 KRR1Q13601 381 aaKnown RBP7.64□□□□□ -1.19
USP54-215ENST00000497106 RAB39AQ14964 217 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 GLYR1Q49A26 553 aaPredicted RBP7.64□□□□□ -1.19
USP54-215ENST00000497106 PLBD1Q6P4A8 553 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 LRRC69Q6ZNQ3 347 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 MRGPREQ86SM8 312 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 ERI1Q8IV48 349 aaKnown RBP7.64□□□□□ -1.19
USP54-215ENST00000497106 CPOQ8IVL8 374 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 MFSD8Q8NHS3 518 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 AMBNQ9NP70 447 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 FBXO34Q9NWN3 711 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 DIMT1Q9UNQ2 313 aaKnown RBP7.64□□□□□ -1.19
USP54-215ENST00000497106 TRAV27A0A087WT01 109 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 ENTPD6O75354 484 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 ZNF432O94892 652 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 HNRNPCP07910 306 aaKnown RBP eCLIP7.64□□□□□ -1.19
USP54-215ENST00000497106 LIPCP11150 499 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 ZNF43P17038 809 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 F8A1P23610 371 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 ZNF136P52737 540 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 FOXK2Q01167 660 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 ZNF91Q05481 1191 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 COL9A2Q14055 689 aaPredicted RBP7.64□□□□□ -1.19
USP54-215ENST00000497106 PCOLCEQ15113 449 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 OR7A5Q15622 319 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 LNX2Q8N448 690 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 PFN4Q8NHR9 129 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 ZNF582Q96NG8 517 aaPredicted RBP7.64□□□□□ -1.19
USP54-215ENST00000497106 OR5B2Q96R09 309 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 RASL10BQ96S79 203 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 SP140LQ9H930 580 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 MED11Q9P086 117 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 IKZF2Q9UKS7 526 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 NOX1Q9Y5S8 564 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 CLDN24A6NM45 220 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 NPIPB9F8W1W9 429 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 STSP08842 583 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 PRKCAP17252 672 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 POU3F2P20265 443 aaPredicted RBP7.64□□□□□ -1.19
USP54-215ENST00000497106 ACVR1BP36896 505 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 SOX3P41225 446 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 RPS5P46782 204 aaKnown RBP7.64□□□□□ -1.19
USP54-215ENST00000497106 SPHARQ15513 63 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 H1FNTQ75WM6 255 aaPredicted RBP7.64□□□□□ -1.19
USP54-215ENST00000497106 GGHQ92820 318 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 ZG16BQ96DA0 208 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 TNFRSF13CQ96RJ3 184 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 RASD1Q9Y272 281 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 DTX4Q9Y2E6 619 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 PLXND1Q9Y4D7 1925 aa7.64□□□□□ -1.19
USP54-215ENST00000497106 TDRD6O60522 2096 aaKnown RBP7.64□□□□□ -1.19
USP54-215ENST00000497106 C11orf98E9PRG8 122 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 TGFBR3LH3BV60 316 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 FFAR1O14842 300 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 KHDRBS3O75525 346 aaKnown RBP7.63□□□□□ -1.19
USP54-215ENST00000497106 TIAF1O95411 115 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 DBTP11182 482 aaKnown RBP7.63□□□□□ -1.19
USP54-215ENST00000497106 CDK5Q00535 292 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 ACER2Q5QJU3 275 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 TMEM201Q5SNT2 666 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 SLC25A30Q5SVS4 291 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 CDCP2Q5VXM1 449 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 KCTD20Q7Z5Y7 419 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 BMPERQ8N8U9 685 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 OR4D11Q8NGI4 311 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 OR51G2Q8NGK0 314 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 OR4K13Q8NH42 304 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 ADAD1Q96M93 576 aaKnown RBP7.63□□□□□ -1.19
USP54-215ENST00000497106 FAM173AQ9BQD7 235 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 TTYH2Q9BSA4 534 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 HMG20AQ9NP66 347 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 GPR83Q9NYM4 423 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 EMC3Q9P0I2 261 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 B3GALT5Q9Y2C3 310 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 CAB39Q9Y376 341 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms