RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 PDLIM1O00151 329 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 CLIC1O00299 241 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 FRS3O43559 492 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 EIF1BO60739 113 aaKnown RBP8.59□□□□□ -1.03
UFD1-210ENST00000494054 HNRNPCL1O60812 293 aaKnown RBP8.59□□□□□ -1.03
UFD1-210ENST00000494054 MRPL33O75394 65 aaKnown RBP8.59□□□□□ -1.03
UFD1-210ENST00000494054 AKR7A3O95154 331 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 HEXAP06865 529 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 ITGA5P08648 1049 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 HNRNPCL4P0DMR1 293 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 BMP2P12643 396 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 CXCR1P25024 350 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 MRPL19P49406 292 aaKnown RBP8.59□□□□□ -1.03
UFD1-210ENST00000494054 CRISP3P54108 245 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 ATP5J2P56134 94 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 RPS4XP62701 263 aaKnown RBP8.59□□□□□ -1.03
UFD1-210ENST00000494054 FAPQ12884 760 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 CEACAM7Q14002 265 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 SLC17A1Q14916 467 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 RGNQ15493 299 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 GABRA6Q16445 453 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 PGGHGQ32M88 737 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 LIN52Q52LA3 116 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 TSPO2Q5TGU0 170 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 RNF220Q5VTB9 566 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 WBP2NLQ6ICG8 309 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 BLOC1S3Q6QNY0 202 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 P2RY8Q86VZ1 359 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 ZNF440Q8IYI8 595 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 CADM2Q8N3J6 435 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 ZIC4Q8N9L1 334 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 OR52N5Q8NH56 324 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 SMAP2Q8WU79 429 aaPredicted RBP8.59□□□□□ -1.03
UFD1-210ENST00000494054 FBXW5Q969U6 566 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 MUCL1Q96DR8 90 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 ATP6V1G3Q96LB4 118 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 MUS81Q96NY9 551 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 NAA11Q9BSU3 229 aaPredicted RBP8.59□□□□□ -1.03
UFD1-210ENST00000494054 BDH2Q9BUT1 245 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 SPATA9Q9BWV2 254 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 CXorf56Q9H5V9 222 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 BCL2L10Q9HD36 194 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 SLC52A3Q9NQ40 469 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 TCF7L2Q9NQB0 619 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 SLC7A10Q9NS82 523 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 ASB6Q9NWX5 421 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 CALML5Q9NZT1 146 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 MALT1Q9UDY8 824 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 MAGED1Q9Y5V3 778 aaPredicted RBP8.59□□□□□ -1.03
UFD1-210ENST00000494054 FLVCR1Q9Y5Y0 555 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 SLC25A15Q9Y619 301 aa8.59□□□□□ -1.03
UFD1-210ENST00000494054 NSD1Q96L73 2696 aaPredicted RBP8.59□□□□□ -1.03
UFD1-210ENST00000494054 TLN2Q9Y4G6 2542 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 CSPG4Q6UVK1 2322 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 A0A096LPI6 279 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 CIB4A0PJX0 185 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 CCT8L1PA6NM43 557 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 ABCD4O14678 606 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 POLR3GO15318 223 aaPredicted RBP8.58□□□□□ -1.04
UFD1-210ENST00000494054 TMCC2O75069 709 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 NDUFS7O75251 213 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 TGDSO95455 350 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 CD8AP01732 235 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 THBS1P07996 1170 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 UQCRBP14927 111 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 PTNP21246 168 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 IDUAP35475 653 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 CDKN1AP38936 164 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 ZNF83P51522 516 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 MAP2K6P52564 334 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 AQP5P55064 265 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 HOXC5Q00444 222 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 LARS2Q15031 903 aaKnown RBP8.58□□□□□ -1.04
UFD1-210ENST00000494054 OR7A5Q15622 319 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 ZNF311Q5JNZ3 666 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 PAGE3Q5JUK9 113 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 OTUD3Q5T2D3 398 aaPredicted RBP8.58□□□□□ -1.04
UFD1-210ENST00000494054 LRIF1Q5T3J3 769 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 C9orf135Q5VTT2 229 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 PAQR6Q6TCH4 344 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 CASP12Q6UXS9 341 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 SERPINA11Q86U17 422 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 COMTD1Q86VU5 262 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 WDR31Q8NA23 367 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 OR9K2Q8NGE7 335 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 LRRC8CQ8TDW0 803 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 C3orf49Q96BT1 292 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 ZNF385AQ96PM9 386 aaKnown RBP8.58□□□□□ -1.04
UFD1-210ENST00000494054 CCDC28BQ9BUN5 200 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 C1QTNF6Q9BXI9 259 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 A4GALTQ9NPC4 353 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 THUMPD1Q9NXG2 353 aaKnown RBP8.58□□□□□ -1.04
UFD1-210ENST00000494054 TAS2R16Q9NYV7 291 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 CISD1Q9NZ45 108 aaKnown RBP8.58□□□□□ -1.04
UFD1-210ENST00000494054 ZNF232Q9UNY5 417 aa8.58□□□□□ -1.04
UFD1-210ENST00000494054 A8MVM7 634 aa8.57□□□□□ -1.04
UFD1-210ENST00000494054 TMEM229AB2RXF0 380 aa8.57□□□□□ -1.04
UFD1-210ENST00000494054 NR5A2O00482 541 aa8.57□□□□□ -1.04
UFD1-210ENST00000494054 NPIPB7O75200 414 aa8.57□□□□□ -1.04
UFD1-210ENST00000494054 NCF2P19878 526 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms