RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TMEM123Q8N131 208 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 TRPV1Q8NER1 839 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 NEIL3Q8TAT5 605 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 BRSK1Q8TDC3 778 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 PIGCQ92535 297 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 IFT74Q96LB3 600 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 COPS8Q99627 209 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 KLHDC3Q9BQ90 382 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 ZSCAN5AQ9BUG6 496 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 RNF126Q9BV68 326 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 ROGDIQ9GZN7 287 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 LRRC40Q9H9A6 602 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 KCNIP1Q9NZI2 227 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 RPS6KB2Q9UBS0 482 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 CDH9Q9ULB4 789 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 TMCC3Q9ULS5 477 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 ERVW-1Q9UQF0 538 aa2.62□□□□□ -1.99
HMGB1P36-201ENST00000487709 KANK1Q14678 1352 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 RPAP1Q9BWH6 1393 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 CLRN2A0PK11 232 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 A8MUA0 341 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 LOC110117498-PIK3R3F6TDL0 507 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 HCRTR1O43613 425 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 ATP5LO75964 103 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 SUPT7LO94864 414 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 TIMP1P01033 207 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 IGHG4P01861 327 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 NR2C1P13056 603 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 CSNK1DP48730 415 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 ARRB1P49407 418 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 HNMTP50135 292 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 APOC4P55056 127 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 SH3BGRP55822 239 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 GPM6BQ13491 265 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 HERPUD1Q15011 391 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 NSUN5P1Q3KNT7 163 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 BOLA3Q53S33 107 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 KLF17Q5JT82 389 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 OR52E8Q6IFG1 317 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 TMIGD1Q6UXZ0 262 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 PGAP1Q75T13 922 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 PLA2G4DQ86XP0 818 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 SLC34A3Q8N130 599 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 FNDC5Q8NAU1 212 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 OR10G3Q8NGC4 313 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 OR52M1Q8NGK5 317 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 C7orf33Q8WU49 177 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 FAM151AQ8WW52 585 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 PAGE5Q96GU1 130 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 P2RY13Q9BPV8 354 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 ZNF670Q9BS34 389 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 NAT9Q9BTE0 207 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 TMEM43Q9BTV4 400 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 NT5C3AQ9H0P0 336 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 AZI2Q9H6S1 392 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 RANBP3Q9H6Z4 567 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 VCPKMTQ9H867 229 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 MRPL47Q9HD33 250 aaKnown RBP2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 SIGLEC8Q9NYZ4 499 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 COX16Q9P0S2 106 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 TIMM10BQ9Y5J6 103 aa2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 ZNF646O15015 1829 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P36-201ENST00000487709 PTCH1Q13635 1447 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 PINLYPA6NC86 204 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 DCTN6O00399 190 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 PRRG1O14668 218 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 AGPAT2O15120 278 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 CLDN9O95484 217 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 OXSR1O95747 527 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 LGI1O95970 557 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 HPGDP15428 266 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 RBMXP38159 391 aaKnown RBP2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 KIR2DS4P43632 304 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 CCT3P49368 545 aaKnown RBP2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 CRYBB1P53674 252 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 NUP107P57740 925 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 PRPS1P60891 318 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 IL24Q13007 206 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 SLC15A2Q16348 729 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 IL17AQ16552 155 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 MARCH8Q5T0T0 291 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 CASC1Q6TDU7 716 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 DCAF4L2Q8NA75 395 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 FAM83FQ8NEG4 500 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 IPMKQ8NFU5 416 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 OR4K14Q8NGD5 310 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 FANK1Q8TC84 345 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 STMN2Q93045 179 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 UBE2E3Q969T4 207 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 COQ2Q96H96 371 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 SLC35E1Q96K37 410 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 SDHCQ99643 169 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 NRIP2Q9BQI9 281 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 VCX2Q9H322 139 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 SUDS3Q9H7L9 328 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 PLSCR3Q9NRY6 295 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 GLRX2Q9NS18 164 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 SMOXQ9NWM0 555 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 FANCIQ9NVI1 1328 aa2.6□□□□□ -1.99
HMGB1P36-201ENST00000487709 PNPLA6Q8IY17 1366 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms