RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 HCKP08631 526 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 GSTT2P0CG29 244 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 SRFP11831 508 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 GTF2F2P13984 249 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 NR4A2P43354 598 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 OR3A3P47888 321 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 OR3A2P47893 321 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 TPBGQ13641 420 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 SGCBQ16585 318 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 NIPAL3Q6P499 406 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 OR8H3Q8N146 312 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 KIAA1143Q96AT1 154 aaPredicted RBP10.9□□□□□ -0.66
TRA2B-214ENST00000487615 GIMAP5Q96F15 307 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 ZNF350Q9GZX5 532 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 TCEAL2Q9H3H9 227 aaPredicted RBP10.9□□□□□ -0.66
TRA2B-214ENST00000487615 SCP2D1Q9UJQ7 156 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 TMA7Q9Y2S6 64 aaKnown RBP10.9□□□□□ -0.66
TRA2B-214ENST00000487615 UGT2A1Q9Y4X1 527 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 V9GY05 133 aa10.9□□□□□ -0.66
TRA2B-214ENST00000487615 HMX3A6NHT5 357 aa10.9□□□□□ -0.67
TRA2B-214ENST00000487615 BRINP1O60477 761 aa10.9□□□□□ -0.67
TRA2B-214ENST00000487615 ATP1B1P05026 303 aa10.9□□□□□ -0.67
TRA2B-214ENST00000487615 SNTA1Q13424 505 aa10.9□□□□□ -0.67
TRA2B-214ENST00000487615 FAM53BQ14153 422 aa10.9□□□□□ -0.67
TRA2B-214ENST00000487615 SFXN4Q6P4A7 337 aa10.9□□□□□ -0.67
TRA2B-214ENST00000487615 TMED4Q7Z7H5 227 aa10.9□□□□□ -0.67
TRA2B-214ENST00000487615 CADM3Q8N126 398 aa10.9□□□□□ -0.67
TRA2B-214ENST00000487615 ZNF283Q8N7M2 679 aa10.9□□□□□ -0.67
TRA2B-214ENST00000487615 BRIX1Q8TDN6 353 aaKnown RBP10.9□□□□□ -0.67
TRA2B-214ENST00000487615 C2orf42Q9NWW7 574 aa10.9□□□□□ -0.67
TRA2B-214ENST00000487615 IL20Q9NYY1 176 aa10.9□□□□□ -0.67
TRA2B-214ENST00000487615 MOKQ9UQ07 419 aa10.9□□□□□ -0.67
TRA2B-214ENST00000487615 EXO1Q9UQ84 846 aaKnown RBP10.9□□□□□ -0.67
TRA2B-214ENST00000487615 ZNF281Q9Y2X9 895 aa10.9□□□□□ -0.67
TRA2B-214ENST00000487615 CKAP5Q14008 2032 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 TMEM72A0PK05 275 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 A6NIZ1 184 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 SLC16A7O60669 478 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 OR8G3PP0DMU2 310 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 HTR3AP46098 478 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 RAP1BP61224 184 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 RAP1AP62834 184 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 SFRP4Q6FHJ7 346 aaPredicted RBP10.89□□□□□ -0.67
TRA2B-214ENST00000487615 MRM1Q6IN84 353 aaKnown RBP10.89□□□□□ -0.67
TRA2B-214ENST00000487615 ITFG2Q969R8 447 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 ZNF486Q96H40 463 aaPredicted RBP10.89□□□□□ -0.67
TRA2B-214ENST00000487615 MED11Q9P086 117 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 IFNA7P01567 189 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 CD3GP09693 182 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 RBMS1P29558 406 aaKnown RBP10.89□□□□□ -0.67
TRA2B-214ENST00000487615 CASP3P42574 277 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 BTG2P78543 158 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 GALEQ14376 348 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 RAB11BQ15907 218 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 GXYLT1Q4G148 440 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 Q6ZS52 159 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 CELF2-AS1Q8N7Q2 184 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 BBS1Q8NFJ9 593 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 OR8S1Q8NH09 359 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 C16orf52Q8NHV5 167 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 POTEKPQ9BYX7 375 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 RANBP3Q9H6Z4 567 aaPredicted RBP10.89□□□□□ -0.67
TRA2B-214ENST00000487615 ANKRD36A6QL64 1941 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 FFAR1O14842 300 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 ZNF208O43345 1280 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 OR7A10O76100 309 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 CYB5AP00167 134 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 DRD5P21918 477 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 LCN1P31025 176 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 CASRP41180 1078 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 MVDP53602 400 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 PSMA6P60900 246 aaKnown RBP10.89□□□□□ -0.67
TRA2B-214ENST00000487615 TATDN3Q17R31 274 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 OR5M10Q6IEU7 315 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 TMEM92Q6UXU6 159 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 CHRDL2Q6WN34 429 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 EGFL6Q8IUX8 553 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 LNX2Q8N448 690 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 TMEM99Q8N816 258 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 RCBTB1Q8NDN9 531 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 NEK7Q8TDX7 302 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 HLA-CQ95604 372 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 ARHGAP9Q9BRR9 750 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 SCN3AQ9NY46 2000 aa10.89□□□□□ -0.67
TRA2B-214ENST00000487615 FOSL2P15408 326 aa10.88□□□□□ -0.67
TRA2B-214ENST00000487615 DAP3P51398 398 aaKnown RBP10.88□□□□□ -0.67
TRA2B-214ENST00000487615 CDK5Q00535 292 aa10.88□□□□□ -0.67
TRA2B-214ENST00000487615 AGERQ15109 404 aa10.88□□□□□ -0.67
TRA2B-214ENST00000487615 ELAVL1Q15717 326 aaKnown RBP10.88□□□□□ -0.67
TRA2B-214ENST00000487615 C6orf183Q5T699 404 aa10.88□□□□□ -0.67
TRA2B-214ENST00000487615 CD300LDQ6UXZ3 194 aa10.88□□□□□ -0.67
TRA2B-214ENST00000487615 OR13C3Q8NGS6 347 aa10.88□□□□□ -0.67
TRA2B-214ENST00000487615 NAT6Q93015 286 aa10.88□□□□□ -0.67
TRA2B-214ENST00000487615 TMEM41AQ96HV5 264 aa10.88□□□□□ -0.67
TRA2B-214ENST00000487615 RBFOX1Q9NWB1 397 aaKnown RBP10.88□□□□□ -0.67
TRA2B-214ENST00000487615 TAS2R8Q9NYW2 309 aa10.88□□□□□ -0.67
TRA2B-214ENST00000487615 GPR55Q9Y2T6 319 aaPredicted RBP10.88□□□□□ -0.67
TRA2B-214ENST00000487615 TSC2P49815 1807 aa10.88□□□□□ -0.67
TRA2B-214ENST00000487615 ZC3H12DA2A288 527 aaKnown RBP10.88□□□□□ -0.67
TRA2B-214ENST00000487615 MEGF11A6BM72 1044 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms