RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 PRKXP51817 358 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 OC90Q02509 493 aaPredicted RBP2.78□□□□□ -1.96
SMC4-215ENST00000484799 BST1Q10588 318 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 MRPL28Q13084 256 aaKnown RBP2.78□□□□□ -1.96
SMC4-215ENST00000484799 SERTAD2Q14140 314 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 RCN1Q15293 331 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 PPP1R7Q15435 360 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 TRIM16LQ309B1 348 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 GLYR1Q49A26 553 aaPredicted RBP2.78□□□□□ -1.96
SMC4-215ENST00000484799 PAGE2BQ5JRK9 111 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 PDZK1Q5T2W1 519 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 OR2A2Q6IF42 318 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 FAM199XQ6PEV8 388 aaPredicted RBP2.78□□□□□ -1.96
SMC4-215ENST00000484799 IGFL2Q6UWQ7 119 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 GDPD3Q7L5L3 318 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 TRIM69Q86WT6 500 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 ENTHD1Q8IYW4 607 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 TTC5Q8N0Z6 440 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 C14orf178Q8N769 122 aaPredicted RBP2.78□□□□□ -1.96
SMC4-215ENST00000484799 CCDC26Q8TAB7 109 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 RAB3IL1Q8TBN0 382 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 FAM122AQ96E09 287 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 SEC22AQ96IW7 307 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 TCEANC2Q96MN5 208 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 CLCC1Q96S66 551 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 GPR61Q9BZJ8 451 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 IKZF5Q9H5V7 419 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 NIPAL2Q9H841 368 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 YY1AP1Q9H869 796 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 POPDC2Q9HBU9 364 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 B3GNT2Q9NY97 397 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 BFARQ9NZS9 450 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 ONECUT1Q9UBC0 465 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 WARS2Q9UGM6 360 aaKnown RBP2.78□□□□□ -1.96
SMC4-215ENST00000484799 RIMS3Q9UJD0 308 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 IKZF2Q9UKS7 526 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 ERVW-1Q9UQF0 538 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 TMED5Q9Y3A6 229 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 PPIAL4AQ9Y536 164 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 CLSPNQ9HAW4 1339 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 A0A1B0GWB2 263 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 HEATR9A2RTY3 570 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 DHRS7CA6NNS2 312 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 TMEM110-MUSTN1A8MSY1 372 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 IDSB3KWA1 339 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 TRDCB7Z8K6 153 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 HAS3O00219 553 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 PFKFB2O60825 505 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 RAMP3O60896 148 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 NOL4O94818 638 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 DIRAS1O95057 198 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 IGLV1-47P01700 117 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 NR2C1P13056 603 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 POLR2EP19388 210 aaKnown RBP2.77□□□□□ -1.97
SMC4-215ENST00000484799 PTBP1P26599 531 aaKnown RBP eCLIP2.77□□□□□ -1.97
SMC4-215ENST00000484799 ADORA2BP29275 332 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 EPHX2P34913 555 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 CRYBB2P43320 205 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 KIR2DS2P43631 304 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 ATP1B3P54709 279 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 RPS8P62241 208 aaKnown RBP2.77□□□□□ -1.97
SMC4-215ENST00000484799 BST2Q10589 180 aaKnown RBP2.77□□□□□ -1.97
SMC4-215ENST00000484799 QRICH1Q2TAL8 776 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 PAN3Q58A45 887 aaKnown RBP2.77□□□□□ -1.97
SMC4-215ENST00000484799 SLC22A10Q63ZE4 541 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 ATL3Q6DD88 541 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 UFSP1Q6NVU6 142 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 ZNF544Q6NX49 715 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 PP632Q6XCG6 107 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 ECHDC2Q86YB7 292 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 CCDC65Q8IXS2 484 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 GPR137CQ8N3F9 429 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 ATP6V0D2Q8N8Y2 350 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 SPATA4Q8NEY3 305 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 OR1L4Q8NGR5 311 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 MAGEE2Q8TD90 523 aaPredicted RBP2.77□□□□□ -1.97
SMC4-215ENST00000484799 PSMG2Q969U7 264 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 CXorf40BQ96DE9 158 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 IL4I1Q96RQ9 567 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 CYP2S1Q96SQ9 504 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 MCHR1Q99705 422 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 VCPKMTQ9H867 229 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 PAK1IP1Q9NWT1 392 aaPredicted RBP2.77□□□□□ -1.97
SMC4-215ENST00000484799 ANGPTL2Q9UKU9 493 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 TMCO1Q9UM00 188 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 PLLPQ9Y342 182 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 PEX16Q9Y5Y5 336 aa2.77□□□□□ -1.97
SMC4-215ENST00000484799 CFAP65Q6ZU64 1925 aaKnown RBP2.77□□□□□ -1.97
SMC4-215ENST00000484799 A0A075B6Q4 140 aa2.76□□□□□ -1.97
SMC4-215ENST00000484799 SMIM28A0A1B0GU29 152 aa2.76□□□□□ -1.97
SMC4-215ENST00000484799 FOXE1O00358 373 aaPredicted RBP2.76□□□□□ -1.97
SMC4-215ENST00000484799 GPX5O75715 221 aa2.76□□□□□ -1.97
SMC4-215ENST00000484799 ATP5LO75964 103 aa2.76□□□□□ -1.97
SMC4-215ENST00000484799 KRT14P02533 472 aa2.76□□□□□ -1.97
SMC4-215ENST00000484799 CRYGBP07316 175 aa2.76□□□□□ -1.97
SMC4-215ENST00000484799 NCK1P16333 377 aa2.76□□□□□ -1.97
SMC4-215ENST00000484799 PSMB1P20618 241 aaKnown RBP2.76□□□□□ -1.97
SMC4-215ENST00000484799 HOXD10P28358 340 aa2.76□□□□□ -1.97
SMC4-215ENST00000484799 CD1CP29017 333 aa2.76□□□□□ -1.97
SMC4-215ENST00000484799 IL12AP29459 219 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms