RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ZNF846Q147U1 533 aa23.87■■□□□ 1.41
SHOX2-204ENST00000483851 ZNF74Q16587 644 aa23.87■■□□□ 1.41
SHOX2-204ENST00000483851 ARHGAP11AQ6P4F7 1023 aa23.87■■□□□ 1.41
SHOX2-204ENST00000483851 C19orf48Q6RUI8 117 aa23.87■■□□□ 1.41
SHOX2-204ENST00000483851 ZNF367Q7RTV3 350 aa23.87■■□□□ 1.41
SHOX2-204ENST00000483851 GID4Q8IVV7 300 aa23.87■■□□□ 1.41
SHOX2-204ENST00000483851 NLGN4YQ8NFZ3 816 aaPredicted RBP23.87■■□□□ 1.41
SHOX2-204ENST00000483851 OR6Q1Q8NGQ2 317 aa23.87■■□□□ 1.41
SHOX2-204ENST00000483851 ENKD1Q9H0I2 346 aa23.87■■□□□ 1.41
SHOX2-204ENST00000483851 FOXJ2Q9P0K8 574 aa23.87■■□□□ 1.41
SHOX2-204ENST00000483851 DIMT1Q9UNQ2 313 aaKnown RBP23.87■■□□□ 1.41
SHOX2-204ENST00000483851 GPR52Q9Y2T5 361 aa23.87■■□□□ 1.41
SHOX2-204ENST00000483851 GADD45AP24522 165 aa23.86■■□□□ 1.41
SHOX2-204ENST00000483851 EGR4Q05215 589 aa23.86■■□□□ 1.41
SHOX2-204ENST00000483851 TMED1Q13445 227 aa23.86■■□□□ 1.41
SHOX2-204ENST00000483851 C3orf38Q5JPI3 329 aa23.86■■□□□ 1.41
SHOX2-204ENST00000483851 IGFN1Q86VF2 1251 aa23.86■■□□□ 1.41
SHOX2-204ENST00000483851 ZNF524Q96C55 264 aa23.86■■□□□ 1.41
SHOX2-204ENST00000483851 CPNE5Q9HCH3 593 aa23.86■■□□□ 1.41
SHOX2-204ENST00000483851 FGF20Q9NP95 211 aaPredicted RBP23.86■■□□□ 1.41
SHOX2-204ENST00000483851 H2AFY2Q9P0M6 372 aaPredicted RBP23.86■■□□□ 1.41
SHOX2-204ENST00000483851 SPEGQ15772 3267 aa23.86■■□□□ 1.41
SHOX2-204ENST00000483851 AIREO43918 545 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 TGFBR1P36897 503 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 MTNR1AP48039 350 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 SERPINB10P48595 397 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 TOMM34Q15785 309 aaPredicted RBP23.85■■□□□ 1.41
SHOX2-204ENST00000483851 DPY19L2P2Q6ZN68 376 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 BCDIN3DQ7Z5W3 292 aaKnown RBP23.85■■□□□ 1.41
SHOX2-204ENST00000483851 MFSD4AQ8N468 514 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 GPX7Q96SL4 187 aaPredicted RBP23.85■■□□□ 1.41
SHOX2-204ENST00000483851 RACGAP1Q9H0H5 632 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 GALNT8Q9NY28 637 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 KLRF1Q9NZS2 232 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 HIF3AQ9Y2N7 669 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 IDH3BO43837 385 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 HK1P19367 917 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 HTR1FP30939 366 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 CDH11P55287 796 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 TUBA1BP68363 451 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 DNASE1L3Q13609 305 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 ARMCX4Q5H9R4 360 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 ARMC4Q5T2S8 1044 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 C16orf87Q6PH81 154 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 TUBA1AQ71U36 451 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 CXXC5Q7LFL8 322 aaKnown RBP23.85■■□□□ 1.41
SHOX2-204ENST00000483851 KLHDC3Q9BQ90 382 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 NDEL1Q9GZM8 345 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 METTL7AQ9H8H3 244 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 ZNF160Q9HCG1 818 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 NANSQ9NR45 359 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 WDR70Q9NW82 654 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 TAS2R16Q9NYV7 291 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 SDK2Q58EX2 2172 aa23.85■■□□□ 1.41
SHOX2-204ENST00000483851 RIIAD1A6NNX1 92 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 ETV2O00321 342 aaPredicted RBP23.84■■□□□ 1.41
SHOX2-204ENST00000483851 ARPC3O15145 178 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 RAB36O95755 333 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 IFNGP01579 166 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 RGS6P49758 472 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 MAP2K6P52564 334 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 CHAF1BQ13112 559 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 OR10G3Q8NGC4 313 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 STK35Q8TDR2 534 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 S100ZQ8WXG8 99 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 ZHX1-C8orf76Q96EF9 292 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 FKRPQ9H9S5 495 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 HMG20AQ9NP66 347 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 FAIMQ9NVQ4 179 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 ZNF229Q9UJW7 825 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 ERGIC3Q9Y282 383 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 WIF1Q9Y5W5 379 aa23.84■■□□□ 1.41
SHOX2-204ENST00000483851 hCG_2014768A0A024R1R8 64 aa23.83■■□□□ 1.41
SHOX2-204ENST00000483851 MAGEB3O15480 346 aa23.83■■□□□ 1.41
SHOX2-204ENST00000483851 SLC25A12O75746 678 aa23.83■■□□□ 1.41
SHOX2-204ENST00000483851 SULT1C4O75897 302 aa23.83■■□□□ 1.41
SHOX2-204ENST00000483851 ASAH2BP0C7U1 165 aa23.83■■□□□ 1.41
SHOX2-204ENST00000483851 PTGDSP41222 190 aa23.83■■□□□ 1.41
SHOX2-204ENST00000483851 DOC2BQ14184 412 aa23.83■■□□□ 1.41
SHOX2-204ENST00000483851 RPS19BP1Q86WX3 136 aaKnown RBP23.83■■□□□ 1.41
SHOX2-204ENST00000483851 LRFN3Q9BTN0 628 aa23.83■■□□□ 1.41
SHOX2-204ENST00000483851 WDR12Q9GZL7 423 aaKnown RBP23.83■■□□□ 1.41
SHOX2-204ENST00000483851 DCSTAMPQ9H295 470 aa23.83■■□□□ 1.41
SHOX2-204ENST00000483851 HINT3Q9NQE9 182 aaKnown RBP23.83■■□□□ 1.41
SHOX2-204ENST00000483851 PPP4R1LQ9P1A2 415 aa23.83■■□□□ 1.41
SHOX2-204ENST00000483851 CHRNA9Q9UGM1 479 aa23.83■■□□□ 1.41
SHOX2-204ENST00000483851 KLHL21Q9UJP4 597 aa23.83■■□□□ 1.41
SHOX2-204ENST00000483851 TRAV36DV7A0A075B6V5 113 aa23.83■■□□□ 1.4
SHOX2-204ENST00000483851 TERTO14746 1132 aaKnown RBP23.83■■□□□ 1.4
SHOX2-204ENST00000483851 MT-ATP6P00846 226 aa23.83■■□□□ 1.4
SHOX2-204ENST00000483851 ZNF3P17036 446 aa23.83■■□□□ 1.4
SHOX2-204ENST00000483851 OTX2P32243 289 aa23.83■■□□□ 1.4
SHOX2-204ENST00000483851 SOX3P41225 446 aa23.83■■□□□ 1.4
SHOX2-204ENST00000483851 CPOQ8IVL8 374 aa23.83■■□□□ 1.4
SHOX2-204ENST00000483851 LRRC17Q8N6Y2 441 aa23.83■■□□□ 1.4
SHOX2-204ENST00000483851 DEFB124Q8NES8 71 aa23.83■■□□□ 1.4
SHOX2-204ENST00000483851 OR52I1Q8NGK6 324 aa23.83■■□□□ 1.4
SHOX2-204ENST00000483851 CHPT1Q8WUD6 406 aa23.83■■□□□ 1.4
SHOX2-204ENST00000483851 RNFT2Q96EX2 444 aa23.83■■□□□ 1.4
SHOX2-204ENST00000483851 OR5M11Q96RB7 305 aa23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms