RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 SLC38A2Q96QD8 506 aa11.15□□□□□ -0.62
TMEM54-206ENST00000482771 RHOXF2Q9BQY4 288 aa11.15□□□□□ -0.62
TMEM54-206ENST00000482771 ZNF350Q9GZX5 532 aa11.15□□□□□ -0.62
TMEM54-206ENST00000482771 ADAM19Q9H013 955 aa11.15□□□□□ -0.62
TMEM54-206ENST00000482771 OR51I1Q9H343 314 aa11.15□□□□□ -0.62
TMEM54-206ENST00000482771 PLK3Q9H4B4 646 aa11.15□□□□□ -0.62
TMEM54-206ENST00000482771 EXD2Q9NVH0 621 aa11.15□□□□□ -0.62
TMEM54-206ENST00000482771 TMEM45AQ9NWC5 275 aa11.15□□□□□ -0.62
TMEM54-206ENST00000482771 SLC35A3Q9Y2D2 325 aa11.15□□□□□ -0.62
TMEM54-206ENST00000482771 TMED7Q9Y3B3 224 aa11.15□□□□□ -0.62
TMEM54-206ENST00000482771 TMEM72A0PK05 275 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 CLDN24A6NM45 220 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 KRT33AO76009 404 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 VENTXO95231 258 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 GIFP27352 417 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 APEX1P27695 318 aaKnown RBP11.14□□□□□ -0.63
TMEM54-206ENST00000482771 HTR3AP46098 478 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 KCNJ10P78508 379 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 ATAD3BQ5T9A4 648 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 AP1ARQ63HQ0 302 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 TYW3Q6IPR3 259 aaKnown RBP11.14□□□□□ -0.63
TMEM54-206ENST00000482771 EMBQ6PCB8 327 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 HOMEZQ8IX15 550 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 CLECL1Q8IZS7 167 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 POMGNT2Q8NAT1 580 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 FNDC5Q8NAU1 212 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 FAM71CQ8NEG0 241 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 HPS1Q92902 700 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 RAB8BQ92930 207 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 DDIT4LQ96D03 193 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 SLC35G5Q96KT7 338 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 ZNF385AQ96PM9 386 aaKnown RBP11.14□□□□□ -0.63
TMEM54-206ENST00000482771 SNX18Q96RF0 628 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.14□□□□□ -0.63
TMEM54-206ENST00000482771 OSGIN1Q9UJX0 560 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 PCDHGB4Q9UN71 923 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 WDR45Q9Y484 360 aa11.14□□□□□ -0.63
TMEM54-206ENST00000482771 SH3PXD2BA1X283 911 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 ZC3H12DA2A288 527 aaKnown RBP11.13□□□□□ -0.63
TMEM54-206ENST00000482771 VSTM5A8MXK1 200 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 NR5A2O00482 541 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 ZNF208O43345 1280 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 SNUPNO95149 360 aaKnown RBP11.13□□□□□ -0.63
TMEM54-206ENST00000482771 LGI1O95970 557 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 TACSTD2P09758 323 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 G6PDP11413 515 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 KRT4P19013 534 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 UBE2NP61088 152 aaKnown RBP11.13□□□□□ -0.63
TMEM54-206ENST00000482771 NAAAQ02083 359 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 PCLAFQ15004 111 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 EFNB3Q15768 340 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 TBRG1Q3YBR2 411 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 OTUD3Q5T2D3 398 aaPredicted RBP11.13□□□□□ -0.63
TMEM54-206ENST00000482771 OR4F3Q6IEY1 312 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 TNFAIP8L2Q6P589 184 aaPredicted RBP11.13□□□□□ -0.63
TMEM54-206ENST00000482771 PAQR6Q6TCH4 344 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 ZCCHC23Q6ZST2 131 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 C4orf33Q8N1A6 199 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 TMEM99Q8N816 258 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 OR9K2Q8NGE7 335 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 NEU4Q8WWR8 484 aaPredicted RBP11.13□□□□□ -0.63
TMEM54-206ENST00000482771 CNOT9Q92600 299 aaKnown RBP11.13□□□□□ -0.63
TMEM54-206ENST00000482771 TMEM45BQ96B21 275 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 ROPN1LQ96C74 230 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 BOD1Q96IK1 185 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 DOK1Q99704 481 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 KATNB1Q9BVA0 655 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 TXLNGYQ9BZA5 131 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 SAP130Q9H0E3 1048 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 OBP2BQ9NPH6 170 aa11.13□□□□□ -0.63
TMEM54-206ENST00000482771 A0A096LPE4 126 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 RNF103-CHMP3A0A140T963 221 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 A0A1W2PPZ6 126 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 SMIM23A6NLE4 172 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 AP3D1O14617 1153 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 NPHS1O60500 1241 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 PDE5AO76074 875 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 AKR7A3O95154 331 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 CPSF4O95639 269 aaKnown RBP11.12□□□□□ -0.63
TMEM54-206ENST00000482771 AGR2O95994 175 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 SHBGP04278 402 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 ERCC1P07992 297 aaPredicted RBP11.12□□□□□ -0.63
TMEM54-206ENST00000482771 GUSBP08236 651 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 EGR1P18146 543 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 TACR3P29371 465 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 ALDH3A1P30838 453 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 CALCRP30988 508 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 THBS4P35443 961 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 SLC1A3P43003 542 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 PPOXP50336 477 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 POLR2HP52434 150 aaKnown RBP11.12□□□□□ -0.63
TMEM54-206ENST00000482771 CDH15P55291 814 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 CLDN8P56748 225 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 TUBA1BP68363 451 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 TUBA4AP68366 448 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 HGFACQ04756 655 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 LGALS3BPQ08380 585 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 CEACAM7Q14002 265 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 TRIP10Q15642 601 aa11.12□□□□□ -0.63
TMEM54-206ENST00000482771 FAM174BQ3ZCQ3 159 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms