RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 ABCD4O14678 606 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 ZNF208O43345 1280 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 MRPL33O75394 65 aaKnown RBP9.23□□□□□ -0.93
CPSF4-212ENST00000482251 ITGA5P08648 1049 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 FOSL1P15407 271 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 HOXB9P17482 250 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-212ENST00000482251 HOXB4P17483 251 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-212ENST00000482251 PTNP21246 168 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 ACAA2P42765 397 aaKnown RBP9.23□□□□□ -0.93
CPSF4-212ENST00000482251 ZNF83P51522 516 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 SLC16A1P53985 500 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 CDH11P55287 796 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 ATP5J2P56134 94 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 COPZ1P61923 177 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 RPS4XP62701 263 aaKnown RBP9.23□□□□□ -0.93
CPSF4-212ENST00000482251 PDK3Q15120 406 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 AGKQ53H12 422 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 ZNF311Q5JNZ3 666 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 PAGE3Q5JUK9 113 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 OTUD3Q5T2D3 398 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-212ENST00000482251 WBP2NLQ6ICG8 309 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 BIVMQ86UB2 503 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 FUNDC1Q8IVP5 155 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 MSRB3Q8IXL7 192 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 ZNF440Q8IYI8 595 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 PIAS4Q8N2W9 510 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-212ENST00000482251 GOLGA6L1Q8N7Z2 621 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 TMEM99Q8N816 258 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 NFKBIDQ8NI38 313 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 IGFBPL1Q8WX77 278 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 MUCL1Q96DR8 90 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 COX4I2Q96KJ9 171 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 C1QTNF6Q9BXI9 259 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 A4GALTQ9NPC4 353 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 ASB6Q9NWX5 421 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 SLC9A8Q9Y2E8 581 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 FLVCR1Q9Y5Y0 555 aa9.23□□□□□ -0.93
CPSF4-212ENST00000482251 A0A096LPI6 279 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 A0A0G2JPF8 293 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 A0A1W2PP18 115 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 LIPT2A6NK58 231 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 OR5H1A6NKK0 313 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 HNRNPCL2B2RXH8 293 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 HNRNPCL3B7ZW38 293 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 M0R1B8 84 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 GPR171O14626 319 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 DNPH1O43598 174 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 EIF1BO60739 113 aaKnown RBP9.22□□□□□ -0.93
CPSF4-212ENST00000482251 HNRNPCL1O60812 293 aaKnown RBP9.22□□□□□ -0.93
CPSF4-212ENST00000482251 CNOT4O95628 575 aaKnown RBP9.22□□□□□ -0.93
CPSF4-212ENST00000482251 GPIP06744 558 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 THBS1P07996 1170 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 HNRNPCL4P0DMR1 293 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 CDH2P19022 906 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-212ENST00000482251 AQP1P29972 269 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 CLK1P49759 484 aaKnown RBP9.22□□□□□ -0.93
CPSF4-212ENST00000482251 H3F3AP84243 136 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 LTBQ06643 244 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 LGALS3BPQ08380 585 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 FADDQ13158 208 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 ZNF672Q499Z4 452 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-212ENST00000482251 TIMM23BQ5SRD1 257 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 GCNT6Q5T4J0 391 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 TSPO2Q5TGU0 170 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 BLOC1S3Q6QNY0 202 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 PAQR6Q6TCH4 344 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 COMTD1Q86VU5 262 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 BBS10Q8TAM1 723 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 SMAP2Q8WU79 429 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-212ENST00000482251 PMM1Q92871 262 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 GTPBP3Q969Y2 492 aaKnown RBP9.22□□□□□ -0.93
CPSF4-212ENST00000482251 C3orf49Q96BT1 292 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 ZNF385AQ96PM9 386 aaKnown RBP9.22□□□□□ -0.93
CPSF4-212ENST00000482251 NAA11Q9BSU3 229 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-212ENST00000482251 SPATA9Q9BWV2 254 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 TAPBPLQ9BX59 468 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 TRIM2Q9C040 744 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 ADAM19Q9H013 955 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 RAD21L1Q9H4I0 556 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 IKZF5Q9H5V7 419 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 SLC7A10Q9NS82 523 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 INTS9Q9NV88 658 aaKnown RBP9.22□□□□□ -0.93
CPSF4-212ENST00000482251 TAS2R16Q9NYV7 291 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 VAPAQ9P0L0 249 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 UPB1Q9UBR1 384 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 MALT1Q9UDY8 824 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-212ENST00000482251 TRAPPC4Q9Y296 219 aa9.22□□□□□ -0.93
CPSF4-212ENST00000482251 AQP7P3A6NL99 342 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 SHISA9B4DS77 424 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 PGM3O95394 542 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 TGDSO95455 350 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 LY6G6DO95868 133 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 DANCRP0C864 163 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 ARAFP10398 606 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 FKBP2P26885 142 aaKnown RBP9.21□□□□□ -0.94
CPSF4-212ENST00000482251 RPS5P46782 204 aaKnown RBP9.21□□□□□ -0.94
CPSF4-212ENST00000482251 SLC25A3Q00325 362 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 VEZF1Q14119 521 aa9.21□□□□□ -0.94
CPSF4-212ENST00000482251 SQLEQ14534 574 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms