RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 ZC3H12DA2A288 527 aaKnown RBP11.28□□□□□ -0.6
IFT88-206ENST00000482172 OR2M5A3KFT3 312 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 GJE1A6NN92 205 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 ZAR1LA6NP61 321 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 SHISA8B8ZZ34 492 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 TRAPPC6AO75865 159 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 CH25HO95992 272 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 TSPAN19P0C672 248 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 ASAH2BP0C7U1 165 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 PTNP21246 168 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 MYF6P23409 242 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 POLR2IP36954 125 aaKnown RBP11.28□□□□□ -0.6
IFT88-206ENST00000482172 RPS5P46782 204 aaKnown RBP11.28□□□□□ -0.6
IFT88-206ENST00000482172 RPS4XP62701 263 aaKnown RBP11.28□□□□□ -0.6
IFT88-206ENST00000482172 PPIAP62937 165 aaKnown RBP11.28□□□□□ -0.6
IFT88-206ENST00000482172 CXADRP78310 365 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 MED21Q13503 144 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 ZNF169Q14929 603 aaPredicted RBP11.28□□□□□ -0.6
IFT88-206ENST00000482172 PTGES3Q15185 160 aaKnown RBP11.28□□□□□ -0.6
IFT88-206ENST00000482172 TOMM20Q15388 145 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 SYT14P1Q58G82 188 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 RPUSD3Q6P087 351 aaKnown RBP11.28□□□□□ -0.6
IFT88-206ENST00000482172 SMARCD3Q6STE5 483 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 OAFQ86UD1 273 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 KIF18BQ86Y91 864 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 P3H2Q8IVL5 708 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 CHERPQ8IWX8 916 aaKnown RBP11.28□□□□□ -0.6
IFT88-206ENST00000482172 FAM109AQ8N4B1 249 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 MARVELD2Q8N4S9 558 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 TMEM251Q8N6I4 163 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 OR14L1PQ8NHC6 308 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 TEX47Q8TBZ9 253 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 TAAR8Q969N4 342 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 SLC25A19Q9HC21 320 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 ACKR4Q9NPB9 350 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 TUBD1Q9UJT1 453 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 TRAPPC4Q9Y296 219 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 RPH3AQ9Y2J0 694 aaPredicted RBP11.28□□□□□ -0.6
IFT88-206ENST00000482172 LRCH1Q9Y2L9 728 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 HDGFL3Q9Y3E1 203 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 CSAG2Q9Y5P2 127 aa11.28□□□□□ -0.6
IFT88-206ENST00000482172 URB1O60287 2271 aaKnown RBP11.28□□□□□ -0.6
IFT88-206ENST00000482172 APC2O95996 2303 aa11.27□□□□□ -0.6
IFT88-206ENST00000482172 FTCDNL1E5RQL4 147 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 H3BN98 237 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 BCKDKO14874 412 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 HIST1H2ABP04908 130 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 BMP7P18075 431 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 IL11P20809 199 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 EPHA2P29317 976 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 IDUAP35475 653 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 GGT2P36268 569 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 GIPRP48546 466 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 CD97P48960 835 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 NUP107P57740 925 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 PRPS1P60891 318 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 FOXK1P85037 733 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 CDK5Q00535 292 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 LTBQ06643 244 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 FHL1Q13642 323 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 SLC10A1Q14973 349 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 INAQ16352 499 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 ZNF691Q5VV52 312 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 C1QL3Q5VWW1 255 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 HIST3H2AQ7L7L0 130 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 MAMDC2Q7Z304 686 aaPredicted RBP11.27□□□□□ -0.61
IFT88-206ENST00000482172 YRDCQ86U90 279 aaKnown RBP11.27□□□□□ -0.61
IFT88-206ENST00000482172 MEX3DQ86XN8 651 aaKnown RBP11.27□□□□□ -0.61
IFT88-206ENST00000482172 C10orf53Q8N6V4 93 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 SCAIQ8N9R8 606 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 SETD9Q8NE22 299 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 OR5M1Q8NGP8 315 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 OR13C2Q8NGS9 318 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 HIST1H2ACQ93077 130 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 ABHD17AQ96GS6 310 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 SFXN2Q96NB2 322 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 MOGAT1Q96PD6 335 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 UBL7Q96S82 380 aaPredicted RBP11.27□□□□□ -0.61
IFT88-206ENST00000482172 APOL4Q9BPW4 351 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 OR11A1Q9GZK7 315 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 ADNPQ9H2P0 1102 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 OR52D1Q9H346 318 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 ZDHHC11Q9H8X9 412 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 BAIAP2Q9UQB8 552 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 HIF3AQ9Y2N7 669 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 GMPPBQ9Y5P6 360 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 CORINQ9Y5Q5 1042 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 AKAP13Q12802 2813 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 SPTBN4Q9H254 2564 aa11.27□□□□□ -0.61
IFT88-206ENST00000482172 LIPT2A6NK58 231 aa11.26□□□□□ -0.61
IFT88-206ENST00000482172 NDUFB2O95178 105 aa11.26□□□□□ -0.61
IFT88-206ENST00000482172 SOX14O95416 240 aa11.26□□□□□ -0.61
IFT88-206ENST00000482172 PMS2P2O95744 297 aa11.26□□□□□ -0.61
IFT88-206ENST00000482172 PDGFAP04085 211 aa11.26□□□□□ -0.61
IFT88-206ENST00000482172 TFPIP10646 304 aa11.26□□□□□ -0.61
IFT88-206ENST00000482172 HOXB1P14653 301 aaPredicted RBP11.26□□□□□ -0.61
IFT88-206ENST00000482172 POU1F1P28069 291 aa11.26□□□□□ -0.61
IFT88-206ENST00000482172 SLC6A6P31641 620 aa11.26□□□□□ -0.61
IFT88-206ENST00000482172 MAGEA5P43359 124 aa11.26□□□□□ -0.61
IFT88-206ENST00000482172 SMSP52788 366 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms