RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 SCML1Q9UN30 329 aa9.92□□□□□ -0.82
VPS52-217ENST00000478934 A8MUA0 341 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 SLC19A2O60779 497 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 SOX30O94993 753 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 ALX3O95076 343 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 MT-ND4P03905 459 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 ANKRD34CP0C6C1 535 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 CT45A8P0DMV1 189 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 CT45A9P0DMV2 189 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 PTHLHP12272 177 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 ATF1P18846 271 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 SLC6A1P30531 599 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 RPL4P36578 427 aaKnown RBP9.91□□□□□ -0.82
VPS52-217ENST00000478934 MRPL28Q13084 256 aaKnown RBP9.91□□□□□ -0.82
VPS52-217ENST00000478934 CT45A2Q5DJT8 189 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 LRRC28Q86X40 367 aaPredicted RBP9.91□□□□□ -0.82
VPS52-217ENST00000478934 SERPINA12Q8IW75 414 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 OR11H7Q8NGC8 314 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 MOSPD2Q8NHP6 518 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 C16orf52Q8NHV5 167 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 ZDHHC1Q8WTX9 485 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 PIGKQ92643 395 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 PELI1Q96FA3 418 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 OR14A2Q96R54 314 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 COQ7Q99807 217 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 ZNF426Q9BUY5 554 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 GSDMCQ9BYG8 508 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 SLC25A18Q9H1K4 315 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 AUNIPQ9H7T9 357 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 BRD7Q9NPI1 651 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 NKIRAS2Q9NYR9 191 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 ST6GALNAC2Q9UJ37 374 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 DMDP11532 3685 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 OR6C68A6NDL8 312 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 CENPBD1B2RD01 187 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 FMO6PO60774 539 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 SLC43A1O75387 559 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 WISP1O95388 367 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 C1QBP02746 253 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 ERP29P30040 261 aaKnown RBP9.91□□□□□ -0.82
VPS52-217ENST00000478934 CLDN12P56749 244 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 STPG1Q5TH74 334 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 PRAMEF17Q5VTA0 474 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 DMKNQ6E0U4 476 aaPredicted RBP9.91□□□□□ -0.82
VPS52-217ENST00000478934 METAP1DQ6UB28 335 aaPredicted RBP9.91□□□□□ -0.82
VPS52-217ENST00000478934 CBLN3Q6UW01 205 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 ZNF655Q8N720 491 aaPredicted RBP9.91□□□□□ -0.82
VPS52-217ENST00000478934 OR6K6Q8NGW6 343 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 DERL3Q96Q80 235 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 TPSD1Q9BZJ3 242 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 LMAN2LQ9H0V9 348 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 CHRNA9Q9UGM1 479 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 TEKT2Q9UIF3 430 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 KLHL21Q9UJP4 597 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 GNG8Q9UK08 70 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 ADAM30Q9UKF2 790 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 CACNG2Q9Y698 323 aa9.91□□□□□ -0.82
VPS52-217ENST00000478934 SPTY2D1-AS1A0A0U1RR47 76 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 IFNA16P05015 189 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 POU3F3P20264 500 aaPredicted RBP9.9□□□□□ -0.82
VPS52-217ENST00000478934 AHCYP23526 432 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 RPS27P42677 84 aaKnown RBP9.9□□□□□ -0.82
VPS52-217ENST00000478934 ATP12AP54707 1039 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 YPEL5P62699 121 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 MAB21L1Q13394 359 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 KCNAB1Q14722 419 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 CD226Q15762 336 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 SLC36A2Q495M3 483 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 PLA1AQ53H76 456 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 OOSP2Q86WS3 158 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 SIAH3Q8IW03 269 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 BCORP1Q8N888 145 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 C19orf47Q8N9M1 422 aaKnown RBP9.9□□□□□ -0.82
VPS52-217ENST00000478934 THAP4Q8WY91 577 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 SEMA6CQ9H3T2 930 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 FKRPQ9H9S5 495 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 UCKL1Q9NWZ5 548 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 POMT2Q9UKY4 750 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 TMEM5Q9Y2B1 443 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 OR10H1Q9Y4A9 318 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 ENTPD2Q9Y5L3 495 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 BLOC1S5-TXNDC5H3BN57 136 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 H7C1C5 153 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 SC5DO75845 299 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 TOXO94900 526 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 CSTAP01040 98 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 RAB3BP20337 219 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 DRD1P21728 446 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 F8A1P23610 371 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 SSTR2P30874 369 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 SLC6A6P31641 620 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 CCR4P51679 360 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 GFERP55789 205 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 FOXL2P58012 376 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 RPS11P62280 158 aaKnown RBP eCLIP9.9□□□□□ -0.82
VPS52-217ENST00000478934 LCN6P62502 163 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 BDH1Q02338 343 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 CEP78Q5JTW2 689 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 NKAIN2Q5VXU1 208 aa9.9□□□□□ -0.82
VPS52-217ENST00000478934 ARMC6Q6NXE6 501 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms