RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 PARP8Q8N3A8 854 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 ZNRF1Q8ND25 227 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 OR4A16Q8NH70 328 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 SNX21Q969T3 373 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 C16orf58Q96GQ5 468 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 BMFQ96LC9 184 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 SPATA13Q96N96 652 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 SIGLEC12Q96PQ1 595 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 SPAG8Q99932 426 aaPredicted RBP3.88□□□□□ -1.79
CCDC171-207ENST00000478913 FAM213AQ9BRX8 229 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 SLC26A1Q9H2B4 701 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 GANQ9H2C0 597 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 LHX9Q9NQ69 397 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 DDX28Q9NUL7 540 aaKnown RBP3.88□□□□□ -1.79
CCDC171-207ENST00000478913 ACOXLQ9NUZ1 547 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 EIF3KQ9UBQ5 218 aaKnown RBP3.88□□□□□ -1.79
CCDC171-207ENST00000478913 SUN2Q9UH99 717 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 DDX19BQ9UMR2 479 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 FARSAQ9Y285 508 aaKnown RBP3.88□□□□□ -1.79
CCDC171-207ENST00000478913 PLXNB1O43157 2135 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 ZNF840PA6NDX5 716 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 SLC28A1O00337 649 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 RASGRF2O14827 1237 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 SCAMP2O15127 329 aaKnown RBP3.87□□□□□ -1.79
CCDC171-207ENST00000478913 GPAA1O43292 621 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 CHMP2AO43633 222 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 ATP6V1G1O75348 118 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 MBD3O95983 291 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 RENP00797 406 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 THRAP10827 490 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 UGT1A6P19224 532 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 HNRNPA2B1P22626 353 aaKnown RBP3.87□□□□□ -1.79
CCDC171-207ENST00000478913 IGFBP5P24593 272 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 OSTNP61366 133 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 NPRL3Q12980 569 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 RPA4Q13156 261 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 C15orf32Q32M92 178 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 HNRNPA1L2Q32P51 320 aaKnown RBP3.87□□□□□ -1.79
CCDC171-207ENST00000478913 EIPR1Q53HC9 387 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 LIPJQ5W064 366 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 REP15Q6BDI9 236 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 RTL6Q6ICC9 239 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 CEACAM19Q7Z692 300 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 TRIM69Q86WT6 500 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 FGFRL1Q8N441 504 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 SFRP1Q8N474 314 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 RTL3Q8N8U3 475 aaKnown RBP3.87□□□□□ -1.79
CCDC171-207ENST00000478913 SPC24Q8NBT2 197 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 BEST4Q8NFU0 473 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 OR4D9Q8NGE8 314 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 C2orf15Q8WU43 125 aaKnown RBP3.87□□□□□ -1.79
CCDC171-207ENST00000478913 KRT35Q92764 455 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 PIWIL1Q96J94 861 aaKnown RBP3.87□□□□□ -1.79
CCDC171-207ENST00000478913 CCT8L2Q96SF2 557 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 JPH2Q9BR39 696 aaPredicted RBP3.87□□□□□ -1.79
CCDC171-207ENST00000478913 TCHPQ9BT92 498 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 FUNDC2Q9BWH2 189 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 BOLA2Q9H3K6 86 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 DPEP3Q9H4B8 488 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 MID1IP1Q9NPA3 183 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 COMMD8Q9NX08 183 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 CLEC4EQ9ULY5 219 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 ZNF835Q9Y2P0 537 aa3.87□□□□□ -1.79
CCDC171-207ENST00000478913 UQCRHLA0A096LP55 91 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 YJEFN3A6XGL0 299 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 FOXI3A8MTJ6 420 aaPredicted RBP3.86□□□□□ -1.79
CCDC171-207ENST00000478913 SURF6O75683 361 aaKnown RBP3.86□□□□□ -1.79
CCDC171-207ENST00000478913 TXNDC12O95881 172 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 OLFM2O95897 454 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 OAS1P00973 400 aaKnown RBP3.86□□□□□ -1.79
CCDC171-207ENST00000478913 UQCRHP07919 91 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 CTSEP14091 401 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 ABOP16442 354 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 BCL3P20749 454 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 HERV-K104P63124 156 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 ARF5P84085 180 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 CDKL1Q00532 357 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 MSLNQ13421 630 aaPredicted RBP3.86□□□□□ -1.79
CCDC171-207ENST00000478913 PDE7AQ13946 482 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 CYLC2Q14093 348 aaPredicted RBP3.86□□□□□ -1.79
CCDC171-207ENST00000478913 EMC2Q15006 297 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 PCK2Q16822 640 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 KLHL40Q2TBA0 621 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 SEL1L3Q68CR1 1132 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 Q6ZPB1 254 aaPredicted RBP3.86□□□□□ -1.79
CCDC171-207ENST00000478913 SNX32Q86XE0 403 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 PLA2G4DQ86XP0 818 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 PDCL2Q8N4E4 241 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 MSANTD4Q8NCY6 345 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 KIAA1524Q8TCG1 905 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 ITLN1Q8WWA0 313 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 MRPL53Q96EL3 112 aaKnown RBP3.86□□□□□ -1.79
CCDC171-207ENST00000478913 CABS1Q96KC9 395 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 C1orf147Q96MC9 270 aaPredicted RBP3.86□□□□□ -1.79
CCDC171-207ENST00000478913 ZNF396Q96N95 335 aaPredicted RBP3.86□□□□□ -1.79
CCDC171-207ENST00000478913 CCDC94Q9BW85 323 aaPredicted RBP3.86□□□□□ -1.79
CCDC171-207ENST00000478913 SLC25A19Q9HC21 320 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 DIMT1Q9UNQ2 313 aaKnown RBP3.86□□□□□ -1.79
CCDC171-207ENST00000478913 FREM1Q5H8C1 2179 aa3.86□□□□□ -1.79
CCDC171-207ENST00000478913 COCHO43405 550 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms