RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 LAMP3Q9UQV4 416 aa16.83■□□□□ 0.28
EPHB4-205ENST00000478459 RNF115Q9Y4L5 304 aa16.83■□□□□ 0.28
EPHB4-205ENST00000478459 USF3Q68DE3 2245 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 IGKV3D-15A0A087WSY6 115 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 HS3ST1O14792 307 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 ZNF208O43345 1280 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 TPST1O60507 370 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 PGM3O95394 542 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 CD3EP07766 207 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 CDH2P19022 906 aaPredicted RBP16.82■□□□□ 0.28
EPHB4-205ENST00000478459 GGT1P19440 569 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 NR1H2P55055 460 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 RIPPLY3P57055 190 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 SQLEQ14534 574 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 PPA1Q15181 289 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 GLIPR1L2Q4G1C9 344 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 NCMAPQ5T1S8 102 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 FBXW9Q5XUX1 488 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 C20orf204Q6ZNR8 217 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 YTHDF3Q7Z739 585 aaKnown RBP16.82■□□□□ 0.28
EPHB4-205ENST00000478459 ZNF440Q8IYI8 595 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 ZNF433Q8N7K0 673 aaPredicted RBP16.82■□□□□ 0.28
EPHB4-205ENST00000478459 RNF217Q8TC41 542 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 SLC25A36Q96CQ1 311 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 MAGEB18Q96M61 343 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 NAA11Q9BSU3 229 aaPredicted RBP16.82■□□□□ 0.28
EPHB4-205ENST00000478459 POTEKPQ9BYX7 375 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 DLL4Q9NR61 685 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 NPAP1Q9NZP6 1156 aa16.82■□□□□ 0.28
EPHB4-205ENST00000478459 CADP27708 2225 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 A0A0G2JND7 137 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 TRIM64A6NGJ6 449 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 TRIM64BA6NI03 449 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 THBS1P07996 1170 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 CBLP22681 906 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 PTH2RP49190 550 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 CLK1P49759 484 aaKnown RBP16.81■□□□□ 0.28
EPHB4-205ENST00000478459 ZNF83P51522 516 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 H3F3AP84243 136 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 LGALS3BPQ08380 585 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 SELPLGQ14242 412 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 LRIF1Q5T3J3 769 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 RNF220Q5VTB9 566 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 SEZ6L2Q6UXD5 910 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 KDM8Q8N371 416 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 BBS10Q8TAM1 723 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 TMEM171Q8WVE6 324 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 PMM1Q92871 262 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 C3orf49Q96BT1 292 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 ZNF385AQ96PM9 386 aaKnown RBP16.81■□□□□ 0.28
EPHB4-205ENST00000478459 OR10A4Q9H209 315 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 RAD21L1Q9H4I0 556 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 ESRP2Q9H6T0 727 aaKnown RBP16.81■□□□□ 0.28
EPHB4-205ENST00000478459 SEC14L4Q9UDX3 406 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 TRAPPC4Q9Y296 219 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 FLVCR1Q9Y5Y0 555 aa16.81■□□□□ 0.28
EPHB4-205ENST00000478459 LIPT2A6NK58 231 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 H7C1Q1 480 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 FAAHO00519 579 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 ARHGEF9O43307 516 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 GPIP06744 558 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 ARAFP10398 606 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 RPS5P46782 204 aaKnown RBP16.8■□□□□ 0.28
EPHB4-205ENST00000478459 CDK6Q00534 326 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 SPOCK1Q08629 439 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 FADDQ13158 208 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 TSPO2Q5TGU0 170 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 TMEM204Q9BSN7 226 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 TAPBPLQ9BX59 468 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 SLC7A10Q9NS82 523 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 ASB6Q9NWX5 421 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 UPB1Q9UBR1 384 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 IFT52Q9Y366 437 aa16.8■□□□□ 0.28
EPHB4-205ENST00000478459 GPR171O14626 319 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 EIF1BO60739 113 aaKnown RBP16.79■□□□□ 0.28
EPHB4-205ENST00000478459 COX5AP20674 150 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 HTR2AP28223 471 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 CDKN1AP38936 164 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 MRPL19P49406 292 aaKnown RBP16.79■□□□□ 0.28
EPHB4-205ENST00000478459 SLC16A1P53985 500 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 MTPNP58546 118 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 SCARB2Q14108 478 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 SLC17A1Q14916 467 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 PDK3Q15120 406 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 C1orf140Q5VVS0 124 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 PIAS4Q8N2W9 510 aaPredicted RBP16.79■□□□□ 0.28
EPHB4-205ENST00000478459 MUCL1Q96DR8 90 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 PIP5K1AQ99755 562 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 WFDC6Q9BQY6 131 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 PIF1Q9H611 641 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 ARMC7Q9H6L4 198 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 NGBQ9NPG2 151 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 THUMPD1Q9NXG2 353 aaKnown RBP16.79■□□□□ 0.28
EPHB4-205ENST00000478459 RPS6KB2Q9UBS0 482 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 ZANQ9Y493 2812 aa16.79■□□□□ 0.28
EPHB4-205ENST00000478459 TRBV5-3A0A0A0MS03 114 aa16.78■□□□□ 0.28
EPHB4-205ENST00000478459 OR5H1A6NKK0 313 aa16.78■□□□□ 0.28
EPHB4-205ENST00000478459 A8MVM7 634 aa16.78■□□□□ 0.28
EPHB4-205ENST00000478459 M0R1B8 84 aa16.78■□□□□ 0.28
EPHB4-205ENST00000478459 ABCD4O14678 606 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms