RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 SELENONQ9NZV5 590 aa16.39■□□□□ 0.22
ATG4B-217ENST00000475693 CORINQ9Y5Q5 1042 aa16.39■□□□□ 0.22
ATG4B-217ENST00000475693 ANKUB1A6NFN9 424 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 CLDN25C9JDP6 229 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 SLC25A12O75746 678 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 GP1BBP13224 206 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 PRKCAP17252 672 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 SLC6A8P48029 635 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 ADGRG3Q86Y34 549 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 CCDC71Q8IV32 467 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-217ENST00000475693 PARP8Q8N3A8 854 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 PIGXQ8TBF5 258 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 OIT3Q8WWZ8 545 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 S100ZQ8WXG8 99 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 KTI12Q96EK9 354 aaPredicted RBP16.39■□□□□ 0.21
ATG4B-217ENST00000475693 ZNF426Q9BUY5 554 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 MROQ9BYG7 248 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 ADNPQ9H2P0 1102 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 ORC6Q9Y5N6 252 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 NCKAP5O14513 1909 aa16.39■□□□□ 0.21
ATG4B-217ENST00000475693 LOC100130705A0A1B0GUX0 176 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 SLC16A6O15403 523 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 OXA1LQ15070 435 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 SLC30A6Q6NXT4 461 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 IGFN1Q86VF2 1251 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 PLCZ1Q86YW0 608 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 MISPQ8IVT2 679 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 OR4K17Q8NGC6 315 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 POC1BQ8TC44 478 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 FBLIM1Q8WUP2 373 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 DNAJA4Q8WW22 397 aaPredicted RBP16.38■□□□□ 0.21
ATG4B-217ENST00000475693 BPIFA2Q96DR5 249 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 FRMD6Q96NE9 622 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 FUNDC2Q9BWH2 189 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 ANKRD19PQ9H560 264 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 CCDC86Q9H6F5 360 aaKnown RBP16.38■□□□□ 0.21
ATG4B-217ENST00000475693 MGAT4BQ9UQ53 548 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 RAXQ9Y2V3 346 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 MED31Q9Y3C7 131 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 SNX5Q9Y5X3 404 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 TNRC6AQ8NDV7 1962 aaKnown RBP16.38■□□□□ 0.21
ATG4B-217ENST00000475693 TRAV27A0A087WT01 109 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 TMEM72A0PK05 275 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 H3BN98 237 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 HTR1AP08908 422 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 PEPDP12955 493 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 CHMP24386 653 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 PSMD7P51665 324 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 RAD23AP54725 363 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 RPP38P78345 283 aaKnown RBP16.38■□□□□ 0.21
ATG4B-217ENST00000475693 TOMM20Q15388 145 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 CLEC12AQ5QGZ9 265 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 SLC16A12Q6ZSM3 486 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 OR13C2Q8NGS9 318 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 OR51A7Q8NH64 312 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 NR4A3Q92570 626 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 PSD2Q9BQI7 771 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 SACM1LQ9NTJ5 587 aa16.38■□□□□ 0.21
ATG4B-217ENST00000475693 CACNA1AO00555 2505 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 TMED7-TICAM2A0A0A6YYA0 188 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 J3QRK9 145 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 CH25HO95992 272 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 ADAP00813 363 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 PLA2G5P39877 138 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 RPS5P46782 204 aaKnown RBP16.37■□□□□ 0.21
ATG4B-217ENST00000475693 ISL1P61371 349 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 C19orf57Q0VDD7 668 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 PTGES3Q15185 160 aaKnown RBP16.37■□□□□ 0.21
ATG4B-217ENST00000475693 CCDC81Q6ZN84 652 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 FADS6Q8N9I5 356 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 OR1J4Q8NGS1 313 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 SNIP1Q8TAD8 396 aaKnown RBP16.37■□□□□ 0.21
ATG4B-217ENST00000475693 NTNG2Q96CW9 530 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 MOGAT1Q96PD6 335 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 DGCR6LQ9BY27 220 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 POLR2J2Q9GZM3 115 aaKnown RBP16.37■□□□□ 0.21
ATG4B-217ENST00000475693 SDHAF3Q9NRP4 125 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 SEC14L4Q9UDX3 406 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 POFUT2Q9Y2G5 429 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 TMED7Q9Y3B3 224 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 ARRDC5A6NEK1 342 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 C1QTNF9BB2RNN3 333 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 KLF4O43474 513 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 ADRB1P08588 477 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 C1QTNF9P0C862 333 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 SAGP10523 405 aaPredicted RBP16.37■□□□□ 0.21
ATG4B-217ENST00000475693 PCMT1P22061 227 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 CXCR1P25024 350 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 PRKCDQ05655 676 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 LTBQ06643 244 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 SNTA1Q13424 505 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 PLPPR5Q32ZL2 321 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 ZNF691Q5VV52 312 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 TIGD3Q6B0B8 471 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 SULF2Q8IWU5 870 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 OR8D4Q8NGM9 314 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 GNPDA2Q8TDQ7 276 aa16.37■□□□□ 0.21
ATG4B-217ENST00000475693 SECISBP2Q96T21 854 aaKnown RBP16.37■□□□□ 0.21
ATG4B-217ENST00000475693 LRRC3CA6NJW4 275 aa16.36■□□□□ 0.21
ATG4B-217ENST00000475693 H3BML4 177 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms