RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SPECC1L-ADORA2AF8WAN1 911 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 CASKO14936 926 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 N4BP1O75113 896 aaKnown RBP4.15□□□□□ -1.75
SMC5-203ENST00000475540 MMP23AO75900 390 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 NPIPA8P0DM63 369 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 ZNF154Q13106 437 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 ATXN7L3Q14CW9 347 aaPredicted RBP4.15□□□□□ -1.75
SMC5-203ENST00000475540 KHDRBS2Q5VWX1 349 aaKnown RBP4.15□□□□□ -1.75
SMC5-203ENST00000475540 LRRC66Q68CR7 880 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 CXCL17Q6UXB2 119 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 STAC2Q6ZMT1 411 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 CENPQQ7L2Z9 268 aaPredicted RBP4.15□□□□□ -1.75
SMC5-203ENST00000475540 PPP1R27Q86WC6 154 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 IFNEQ86WN2 208 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 ZNF100Q8IYN0 542 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 KCNG3Q8TAE7 436 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 SCFD1Q8WVM8 642 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 PSMG2Q969U7 264 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 COMMD4Q9H0A8 199 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 STMN4Q9H169 189 aaPredicted RBP4.15□□□□□ -1.75
SMC5-203ENST00000475540 NANOGQ9H9S0 305 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 GPN2Q9H9Y4 310 aaPredicted RBP4.15□□□□□ -1.75
SMC5-203ENST00000475540 RAB18Q9NP72 206 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 NPIPA1Q9UND3 350 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 TRAF3IP3Q9Y228 551 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 CDC42BPBQ9Y5S2 1711 aa4.15□□□□□ -1.75
SMC5-203ENST00000475540 PIK3R4Q99570 1358 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 EIF4G1Q04637 1599 aaKnown RBP4.14□□□□□ -1.75
SMC5-203ENST00000475540 COL4A4P53420 1690 aaPredicted RBP4.14□□□□□ -1.75
SMC5-203ENST00000475540 SAGE2PA6NJ88 616 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 NBR2O15453 112 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 RNF13O43567 381 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 CDH16O75309 829 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 TRIM3O75382 744 aaPredicted RBP4.14□□□□□ -1.75
SMC5-203ENST00000475540 STX11O75558 287 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 SCRG1O75711 98 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 BBOX1O75936 387 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 B3GAT3O94766 335 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 HPNP05981 417 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 S100A9P06702 114 aaKnown RBP4.14□□□□□ -1.75
SMC5-203ENST00000475540 TPM1P09493 284 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 POU2F1P14859 743 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 MAGEA5P43359 124 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 AP3M2P53677 418 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 NTHL1P78549 312 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 SPAG1Q07617 926 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 C6orf226Q5I0X4 101 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 EOGTQ5NDL2 527 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 RAET1LQ5VY80 246 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 ATL3Q6DD88 541 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 OR4F3Q6IEY1 312 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 FAM71F2Q6NXP2 309 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 SCYL2Q6P3W7 929 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 KCNIP4Q6PIL6 250 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 ENTHD1Q8IYW4 607 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 COMMD1Q8N668 190 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 FAM81AQ8TBF8 368 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 TSEN15Q8WW01 171 aaKnown RBP4.14□□□□□ -1.75
SMC5-203ENST00000475540 HAVCR1Q96D42 359 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 PELI1Q96FA3 418 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 TSNARE1Q96NA8 513 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 PARD6BQ9BYG5 372 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 SLC25A51Q9H1U9 297 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 MRPL39Q9NYK5 338 aaKnown RBP4.14□□□□□ -1.75
SMC5-203ENST00000475540 GALPQ9UBC7 116 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 ZNF639Q9UID6 485 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 GMPPBQ9Y5P6 360 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 TNIKQ9UKE5 1360 aa4.14□□□□□ -1.75
SMC5-203ENST00000475540 A0A1B0GTQ1 180 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 A0A1B0GVL5 298 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 FAM74A7A6NL05 159 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 DNAJB6O75190 326 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 UPK3AO75631 287 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 IGF1P05019 195 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 PGCP20142 388 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 ADORA2BP29275 332 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 RBMXP38159 391 aaKnown RBP4.13□□□□□ -1.75
SMC5-203ENST00000475540 OR1G1P47890 313 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 CASP4P49662 377 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 RND3P61587 244 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 MRPS11P82912 194 aaKnown RBP4.13□□□□□ -1.75
SMC5-203ENST00000475540 EWSR1Q01844 656 aaKnown RBP eCLIP4.13□□□□□ -1.75
SMC5-203ENST00000475540 MECOMQ03112 1051 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 LRRC36Q1X8D7 754 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 FAM74A3Q4VXF1 159 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 SFT2D3Q587I9 215 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 AADACL4Q5VUY2 407 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 IGFL3Q6UXB1 125 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 LANCL3Q6ZV70 420 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 MOB3BQ86TA1 216 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 LUZP2Q86TE4 346 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 EGFL6Q8IUX8 553 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 CCDC50Q8IVM0 306 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 ZNF321PQ8N8H1 164 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 Q8N9L7 120 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 OR4C5Q8NGB2 326 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 OR1F12Q8NHA8 337 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 ARNTL2Q8WYA1 636 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 C12orf66Q96MD2 445 aa4.13□□□□□ -1.75
SMC5-203ENST00000475540 NOL4LQ96MY1 436 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms