RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 DNAJA3Q96EY1 480 aa13.74□□□□□ -0.21
SRRT-209ENST00000474896 SAR1AQ9NR31 198 aa13.74□□□□□ -0.21
SRRT-209ENST00000474896 ACER3Q9NUN7 267 aa13.74□□□□□ -0.21
SRRT-209ENST00000474896 TMEM45AQ9NWC5 275 aa13.74□□□□□ -0.21
SRRT-209ENST00000474896 MKLN1Q9UL63 735 aa13.74□□□□□ -0.21
SRRT-209ENST00000474896 DUXAA6NLW8 204 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 M0R1B8 84 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 STX11O75558 287 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 PGRP06401 933 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 UBTFL6P0CB48 400 aaPredicted RBP13.73□□□□□ -0.21
SRRT-209ENST00000474896 SLC25A16P16260 332 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 PGCP20142 388 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 POLR2JP52435 117 aaKnown RBP13.73□□□□□ -0.21
SRRT-209ENST00000474896 HBA1P69905 142 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 PHC1P78364 1004 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 AGKQ53H12 422 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 SYT14P1Q58G82 188 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 GKAP1Q5VSY0 366 aaPredicted RBP13.73□□□□□ -0.21
SRRT-209ENST00000474896 BHLHB9Q6PI77 547 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 B3GLCTQ6Y288 498 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 C6orf120Q7Z4R8 191 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 FUNDC1Q8IVP5 155 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 CLEC4FQ8N1N0 589 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 FAM168AQ92567 244 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 MUS81Q96NY9 551 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 CTPS2Q9NRF8 586 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 MRGBPQ9NV56 204 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 ASB6Q9NWX5 421 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 TMEM160Q9NX00 188 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 CCDC167Q9P0B6 97 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 ARL2BPQ9Y2Y0 163 aa13.73□□□□□ -0.21
SRRT-209ENST00000474896 CENPVL1A0A0U1RR11 272 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 ZNF716A6NP11 495 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 NR5A2O00482 541 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 CCDC22O60826 627 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 SCN2BO60939 215 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 MRPL33O75394 65 aaKnown RBP13.72□□□□□ -0.21
SRRT-209ENST00000474896 UGT2B17O75795 530 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 F12P00748 615 aaPredicted RBP13.72□□□□□ -0.21
SRRT-209ENST00000474896 IL6P05231 212 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 SOAT1P35610 550 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 APOBEC1P41238 236 aaKnown RBP13.72□□□□□ -0.21
SRRT-209ENST00000474896 CASP9P55211 416 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 FOXG1P55316 489 aaPredicted RBP13.72□□□□□ -0.21
SRRT-209ENST00000474896 GABRA6Q16445 453 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 ARHGAP11BQ3KRB8 267 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 ANXA8L1Q5VT79 327 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 ABLIM2Q6H8Q1 611 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 BLOC1S3Q6QNY0 202 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 EIF3MQ7L2H7 374 aaKnown RBP13.72□□□□□ -0.21
SRRT-209ENST00000474896 CCDC103Q8IW40 242 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 ZNF563Q8TA94 476 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 SLC25A43Q8WUT9 341 aaPredicted RBP13.72□□□□□ -0.21
SRRT-209ENST00000474896 ZHX1-C8orf76Q96EF9 292 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 INPP5KQ9BT40 448 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 SERHL2Q9H4I8 314 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 TAS2R16Q9NYV7 291 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 ATP23Q9Y6H3 246 aa13.72□□□□□ -0.21
SRRT-209ENST00000474896 H7C417 338 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 RNASET2O00584 256 aaKnown RBP13.71□□□□□ -0.21
SRRT-209ENST00000474896 NDUFAB1O14561 156 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 GPR171O14626 319 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 AK1P00568 194 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 IGHV4-31P0DP07 118 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 RYKP34925 604 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 KLF10Q13118 480 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 MAPK14Q16539 360 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 OR7E24Q6IFN5 339 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 ZNF544Q6NX49 715 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 ANKRD46Q86W74 232 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 CLECL1Q8IZS7 167 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 ARIH2OSQ8N7S6 290 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 WDR31Q8NA23 367 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 VPS37AQ8NEZ2 397 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 OR52E4Q8NGH9 312 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 BCAS4Q8TDM0 211 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 C10orf105Q8TEF2 133 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 PROX1Q92786 737 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 VPS33AQ96AX1 596 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 SPDL1Q96EA4 605 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 ARL5BQ96KC2 179 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 OR52E6Q96RD3 313 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 CCDC106Q9BWC9 280 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 SHARPINQ9H0F6 387 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 ARMCX1Q9P291 453 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 LPAR3Q9UBY5 353 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 CHRNA9Q9UGM1 479 aa13.71□□□□□ -0.21
SRRT-209ENST00000474896 SPIN1Q9Y657 262 aaPredicted RBP13.71□□□□□ -0.21
SRRT-209ENST00000474896 PRSS51A0A1B0GVH4 220 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 CCDC154A6NI56 674 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 BCAS1O75363 584 aaPredicted RBP13.7□□□□□ -0.22
SRRT-209ENST00000474896 PMS2P2O95744 297 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 ITGA5P08648 1049 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 BMP4P12644 408 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 CCNA2P20248 432 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 USF1P22415 310 aaPredicted RBP13.7□□□□□ -0.22
SRRT-209ENST00000474896 PGM1P36871 562 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 EFNA4P52798 201 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 OR2B6P58173 313 aa13.7□□□□□ -0.22
SRRT-209ENST00000474896 LSM11P83369 360 aaKnown RBP eCLIP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms