RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 BIRC5O15392 142 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 SNUPNO95149 360 aaKnown RBP11.72□□□□□ -0.53
COPS7B-219ENST00000474042 CSF3P09919 207 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 CCNA2P20248 432 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 TACR3P29371 465 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 CHI3L1P36222 383 aaPredicted RBP11.72□□□□□ -0.53
COPS7B-219ENST00000474042 MAP2K6P52564 334 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 TXNL4AP83876 142 aaKnown RBP11.72□□□□□ -0.53
COPS7B-219ENST00000474042 RAB35Q15286 201 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 SYPL1Q16563 259 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 FAM174BQ3ZCQ3 159 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 C9orf135Q5VTT2 229 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 OGFOD2Q6N063 350 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 LRRC74BQ6ZQY2 392 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 DEPDC4Q8N2C3 294 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 WDR60Q8WVS4 1066 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 TMEM158Q8WZ71 300 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 FAM168AQ92567 244 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 PMM1Q92871 262 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 BOD1Q96IK1 185 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 NAA11Q9BSU3 229 aaPredicted RBP11.72□□□□□ -0.53
COPS7B-219ENST00000474042 MANSC1Q9H8J5 431 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 FKRPQ9H9S5 495 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 PARPBPQ9NWS1 579 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 UPB1Q9UBR1 384 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 ALDOCP09972 364 aaKnown RBP11.71□□□□□ -0.53
COPS7B-219ENST00000474042 IGHV4-31P0DP07 118 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 ZNF16P17020 682 aaPredicted RBP11.71□□□□□ -0.53
COPS7B-219ENST00000474042 LBPP18428 481 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 MPGP29372 298 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 S100A3P33764 101 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 SLC1A3P43003 542 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 EFNA4P52798 201 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 TGFBR3Q03167 851 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 EPS8Q12929 822 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 MRPL2Q5T653 305 aaKnown RBP11.71□□□□□ -0.53
COPS7B-219ENST00000474042 RNF130Q86XS8 419 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 KIRREL3Q8IZU9 778 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 ZIC4Q8N9L1 334 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 NANOS1Q8WY41 292 aaKnown RBP11.71□□□□□ -0.53
COPS7B-219ENST00000474042 PROX1Q92786 737 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 TEX37Q96LM6 180 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 C1QTNF6Q9BXI9 259 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 ADAM19Q9H013 955 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 MEAF6Q9HAF1 191 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 ATP23Q9Y6H3 246 aa11.71□□□□□ -0.53
COPS7B-219ENST00000474042 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.7□□□□□ -0.544e-6■■□□□ 14.5
COPS7B-219ENST00000474042 DSPPQ9NZW4 1301 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 WDR91A4D1P6 747 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 CFAP73A6NFT4 308 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 LIPT2A6NK58 231 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 AQP7P3A6NL99 342 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 VWC2LB2RUY7 222 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 ATP6V1G2-DDX39BF2Z307 99 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 TM9SF1O15321 606 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 PHF1O43189 567 aaPredicted RBP11.7□□□□□ -0.54
COPS7B-219ENST00000474042 APOBEC3AP31941 199 aaPredicted RBP11.7□□□□□ -0.54
COPS7B-219ENST00000474042 CDKN2CP42773 168 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 SLC1A6P48664 564 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 RPL14P50914 215 aaKnown RBP11.7□□□□□ -0.54
COPS7B-219ENST00000474042 ANXA11P50995 505 aaKnown RBP11.7□□□□□ -0.54
COPS7B-219ENST00000474042 CHRNB3Q05901 458 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 MAPK11Q15759 364 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 MST1LQ2TV78 715 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 OTUD3Q5T2D3 398 aaPredicted RBP11.7□□□□□ -0.54
COPS7B-219ENST00000474042 POMGNT2Q8NAT1 580 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 OR9K2Q8NGE7 335 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 ZNF385AQ96PM9 386 aaKnown RBP11.7□□□□□ -0.54
COPS7B-219ENST00000474042 SF3B5Q9BWJ5 86 aaKnown RBP11.7□□□□□ -0.54
COPS7B-219ENST00000474042 NUF2Q9BZD4 464 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 PIF1Q9H611 641 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 SSU72Q9NP77 194 aaKnown RBP11.7□□□□□ -0.54
COPS7B-219ENST00000474042 AIG1Q9NVV5 245 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 LPAR3Q9UBY5 353 aa11.7□□□□□ -0.54
COPS7B-219ENST00000474042 CCDC154A6NI56 674 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 LY6HO94772 140 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 GPIP06744 558 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 DBIP07108 87 aaKnown RBP11.69□□□□□ -0.54
COPS7B-219ENST00000474042 BMP4P12644 408 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 UQCRBP14927 111 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 IL12AP29459 219 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 P2RY4P51582 365 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 PRPS1P60891 318 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 UFM1P61960 85 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 GNA13Q14344 377 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 SWI5Q1ZZU3 235 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 COX20Q5RI15 118 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 CYB5R2Q6BCY4 276 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 ZNF440Q8IYI8 595 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 MREGQ8N565 214 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 TRIML2Q8N7C3 387 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 TMEM99Q8N816 258 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 PANX1Q96RD7 426 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 KCNK17Q96T54 332 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 MTHFD2LQ9H903 347 aaPredicted RBP11.69□□□□□ -0.54
COPS7B-219ENST00000474042 OBP2BQ9NPH6 170 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 PRDM4Q9UKN5 801 aa11.69□□□□□ -0.54
COPS7B-219ENST00000474042 IGHV1-18A0A0C4DH31 117 aa11.68□□□□□ -0.54
COPS7B-219ENST00000474042 CDHR4A6H8M9 788 aa11.68□□□□□ -0.54
COPS7B-219ENST00000474042 SDHDO14521 159 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms