RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 FOXG1P55316 489 aaPredicted RBP19.83■□□□□ 0.77
C9orf3-213ENST00000471978 GABRA6Q16445 453 aa19.83■□□□□ 0.77
C9orf3-213ENST00000471978 LIN52Q52LA3 116 aa19.83■□□□□ 0.77
C9orf3-213ENST00000471978 OR7E24Q6IFN5 339 aa19.83■□□□□ 0.77
C9orf3-213ENST00000471978 PAQR6Q6TCH4 344 aa19.83■□□□□ 0.77
C9orf3-213ENST00000471978 KLHL17Q6TDP4 642 aa19.83■□□□□ 0.77
C9orf3-213ENST00000471978 ZNF836Q6ZNA1 936 aa19.83■□□□□ 0.77
C9orf3-213ENST00000471978 MAVSQ7Z434 540 aa19.83■□□□□ 0.77
C9orf3-213ENST00000471978 PIAS4Q8N2W9 510 aaPredicted RBP19.83■□□□□ 0.77
C9orf3-213ENST00000471978 OR52E4Q8NGH9 312 aa19.83■□□□□ 0.77
C9orf3-213ENST00000471978 ITCHQ96J02 903 aa19.83■□□□□ 0.77
C9orf3-213ENST00000471978 MUS81Q96NY9 551 aa19.83■□□□□ 0.77
C9orf3-213ENST00000471978 SLCO5A1Q9H2Y9 848 aa19.83■□□□□ 0.77
C9orf3-213ENST00000471978 RMND5AQ9H871 391 aa19.83■□□□□ 0.77
C9orf3-213ENST00000471978 TPT1P8Q9HAU6 139 aa19.83■□□□□ 0.77
C9orf3-213ENST00000471978 SDR39U1Q9NRG7 319 aaPredicted RBP19.83■□□□□ 0.77
C9orf3-213ENST00000471978 UPB1Q9UBR1 384 aa19.83■□□□□ 0.77
C9orf3-213ENST00000471978 MGAT4BQ9UQ53 548 aa19.83■□□□□ 0.77
C9orf3-213ENST00000471978 DNHD1Q96M86 4753 aa19.83■□□□□ 0.76
C9orf3-213ENST00000471978 DSPPQ9NZW4 1301 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 UBDO15205 165 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 BCHEP06276 602 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 ITGA5P08648 1049 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 TFPTP0C1Z6 253 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 ZCCHC18P0CG32 403 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 PTAFRP25105 342 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 ACVR1BP36896 505 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 CRISP3P54108 245 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 DSTNP60981 165 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 CEACAM7Q14002 265 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 SLC17A1Q14916 467 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 DTX2Q86UW9 622 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 MAPK1IP1LQ8NDC0 245 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 SLC38A5Q8WUX1 472 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 OR52B2Q96RD2 323 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 GRIP2Q9C0E4 1043 aa19.82■□□□□ 0.76
C9orf3-213ENST00000471978 PDLIM1O00151 329 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 NDUFS7O75251 213 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 GPIP06744 558 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 THBS1P07996 1170 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 PTNP21246 168 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 CD40P25942 277 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 ACAA2P42765 397 aaKnown RBP19.81■□□□□ 0.76
C9orf3-213ENST00000471978 POLR2JP52435 117 aaKnown RBP19.81■□□□□ 0.76
C9orf3-213ENST00000471978 COPZ1P61923 177 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 OR7A5Q15622 319 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 GTDC1Q4AE62 458 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 OTUD3Q5T2D3 398 aaPredicted RBP19.81■□□□□ 0.76
C9orf3-213ENST00000471978 C9orf135Q5VTT2 229 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 AGAP6Q5VW22 663 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 SLC22A25Q6T423 547 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 MSANTD1Q6ZTZ1 278 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 CADM2Q8N3J6 435 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 OR9I1Q8NGQ6 314 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 VPS33AQ96AX1 596 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 TLCD1Q96CP7 247 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 AURKBQ96GD4 344 aaPredicted RBP19.81■□□□□ 0.76
C9orf3-213ENST00000471978 HS6ST2Q96MM7 605 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 REG4Q9BYZ8 158 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 SLC7A10Q9NS82 523 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 GDF2Q9UK05 429 aaPredicted RBP19.81■□□□□ 0.76
C9orf3-213ENST00000471978 POU2F3Q9UKI9 436 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 PRDM4Q9UKN5 801 aa19.81■□□□□ 0.76
C9orf3-213ENST00000471978 ZNF443Q9Y2A4 671 aaPredicted RBP19.81■□□□□ 0.76
C9orf3-213ENST00000471978 LIPT2A6NK58 231 aa19.8■□□□□ 0.76
C9orf3-213ENST00000471978 M0R1B8 84 aa19.8■□□□□ 0.76
C9orf3-213ENST00000471978 SPOCK1Q08629 439 aa19.8■□□□□ 0.76
C9orf3-213ENST00000471978 LARS2Q15031 903 aaKnown RBP19.8■□□□□ 0.76
C9orf3-213ENST00000471978 RPS26P11Q5JNZ5 115 aaPredicted RBP19.8■□□□□ 0.76
C9orf3-213ENST00000471978 C6orf10Q5SRN2 563 aa19.8■□□□□ 0.76
C9orf3-213ENST00000471978 TSPO2Q5TGU0 170 aa19.8■□□□□ 0.76
C9orf3-213ENST00000471978 WBP2NLQ6ICG8 309 aa19.8■□□□□ 0.76
C9orf3-213ENST00000471978 PRIMA1Q86XR5 153 aa19.8■□□□□ 0.76
C9orf3-213ENST00000471978 MIER2Q8N344 545 aa19.8■□□□□ 0.76
C9orf3-213ENST00000471978 CLIP4Q8N3C7 705 aa19.8■□□□□ 0.76
C9orf3-213ENST00000471978 TMEM99Q8N816 258 aa19.8■□□□□ 0.76
C9orf3-213ENST00000471978 C1QTNF6Q9BXI9 259 aa19.8■□□□□ 0.76
C9orf3-213ENST00000471978 BARX1Q9HBU1 254 aaPredicted RBP19.8■□□□□ 0.76
C9orf3-213ENST00000471978 TMBIM4Q9HC24 238 aa19.8■□□□□ 0.76
C9orf3-213ENST00000471978 THUMPD1Q9NXG2 353 aaKnown RBP19.8■□□□□ 0.76
C9orf3-213ENST00000471978 DCTN4Q9UJW0 460 aa19.8■□□□□ 0.76
C9orf3-213ENST00000471978 ZNF232Q9UNY5 417 aa19.8■□□□□ 0.76
C9orf3-213ENST00000471978 PLCE1Q9P212 2302 aa19.79■□□□□ 0.76
C9orf3-213ENST00000471978 A0A0G2JPF8 293 aa19.79■□□□□ 0.76
C9orf3-213ENST00000471978 TMEM247A6NEH6 219 aa19.79■□□□□ 0.76
C9orf3-213ENST00000471978 HNRNPCL2B2RXH8 293 aa19.79■□□□□ 0.76
C9orf3-213ENST00000471978 HNRNPCL3B7ZW38 293 aa19.79■□□□□ 0.76
C9orf3-213ENST00000471978 E7EQL1 145 aa19.79■□□□□ 0.76
C9orf3-213ENST00000471978 HNRNPCL1O60812 293 aaKnown RBP19.79■□□□□ 0.76
C9orf3-213ENST00000471978 AKR7A3O95154 331 aa19.79■□□□□ 0.76
C9orf3-213ENST00000471978 HNRNPCL4P0DMR1 293 aa19.79■□□□□ 0.76
C9orf3-213ENST00000471978 NCF2P19878 526 aaPredicted RBP19.79■□□□□ 0.76
C9orf3-213ENST00000471978 KRTAP1-1Q07627 177 aa19.79■□□□□ 0.76
C9orf3-213ENST00000471978 BNIP2Q12982 314 aa19.79■□□□□ 0.76
C9orf3-213ENST00000471978 ZSWIM7Q19AV6 140 aa19.79■□□□□ 0.76
C9orf3-213ENST00000471978 RNF220Q5VTB9 566 aa19.79■□□□□ 0.76
C9orf3-213ENST00000471978 DEPDC4Q8N2C3 294 aa19.79■□□□□ 0.76
C9orf3-213ENST00000471978 WDR31Q8NA23 367 aa19.79■□□□□ 0.76
C9orf3-213ENST00000471978 OR9K2Q8NGE7 335 aa19.79■□□□□ 0.76
C9orf3-213ENST00000471978 TMEM45BQ96B21 275 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms