RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 NUP37Q8NFH4 326 aa11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 OR4F15Q8NGB8 312 aa11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 OR1K1Q8NGR3 316 aa11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 UBASH3BQ8TF42 649 aa11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 FAM216AQ8WUB2 273 aa11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 COQ8BQ96D53 544 aa11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 AURKBQ96GD4 344 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 ZNF385AQ96PM9 386 aaKnown RBP11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 SAP130Q9H0E3 1048 aa11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 SEC61A2Q9H9S3 476 aa11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 ATAD3AQ9NVI7 634 aa11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 TMEM45AQ9NWC5 275 aa11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 CRNNQ9UBG3 495 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 GIMAP2Q9UG22 337 aa11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 TBK1Q9UHD2 729 aa11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 SLC35A3Q9Y2D2 325 aa11.11□□□□□ -0.63
TRAPPC12-216ENST00000469400 TMED7-TICAM2A0A0A6YYA0 188 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 TMEM72A0PK05 275 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 SH3PXD2BA1X283 911 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 LYNX1G3V0Z9 82 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 NR5A2O00482 541 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 ZNF208O43345 1280 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 LGI1O95970 557 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 IGLV1-44P01699 117 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 IGFBP1P08833 259 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 LYNX1P0DP58 116 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 CPA3P15088 417 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 PAX7P23759 505 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 THBS4P35443 961 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 IDH2P48735 452 aaKnown RBP11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 UBE2NP61088 152 aaKnown RBP11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 TUBA1BP68363 451 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 TUBA4AP68366 448 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 PLAURQ03405 335 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 HGFACQ04756 655 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 CCDC153Q494R4 210 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 AP1ARQ63HQ0 302 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 PAQR6Q6TCH4 344 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 TUBA1AQ71U36 451 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 C16orf62Q7Z3J2 963 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 C6orf120Q7Z4R8 191 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 ABHD12BQ7Z5M8 362 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 DDIASQ8IXT1 998 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 KRTCAP2Q8N6L1 136 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 OR9K2Q8NGE7 335 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 ZNF418Q8TF45 676 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 DDIT4LQ96D03 193 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 ZG16BQ96DA0 208 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 PRPF18Q99633 342 aaKnown RBP11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 ZNF442Q9H7R0 627 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 HIF1ANQ9NWT6 349 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 PSMC3IPQ9P2W1 217 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 PCDHGB4Q9UN71 923 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 TMED7Q9Y3B3 224 aa11.1□□□□□ -0.63
TRAPPC12-216ENST00000469400 TGP01266 2768 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 ARPC4-TTLL3A0A0A6YYG9 625 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 TMEM129A0AVI4 362 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 ZC3H12DA2A288 527 aaKnown RBP11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 CLDN24A6NM45 220 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 TMEM233B4DJY2 109 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 PIP5K1BO14986 540 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 RIPK2O43353 540 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 PEX11AO75192 247 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 LYPLA1O75608 230 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 KRT33AO76009 404 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 NPR2P20594 1047 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 MAPK1P28482 360 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 HTR3AP46098 478 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 KHKP50053 298 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 SCGB2A2Q13296 93 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 ADRM1Q16186 407 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 C3orf36Q3SXR2 165 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 UGT3A2Q3SY77 523 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 OTUD3Q5T2D3 398 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 TYW3Q6IPR3 259 aaKnown RBP11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 SPATA21Q7Z572 469 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 HMGN2P46Q86SG4 172 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 PEG10Q86TG7 708 aaKnown RBP11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 ARFGAP2Q8N6H7 521 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 TMEM99Q8N816 258 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 CCDC63Q8NA47 563 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 TWIST2Q8WVJ9 160 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 OIT3Q8WWZ8 545 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 BCL2L2Q92843 193 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 PMM1Q92871 262 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 TMEM186Q96B77 213 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 PPP3R2Q96LZ3 170 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 C1orf50Q9BV19 199 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 SF3B5Q9BWJ5 86 aaKnown RBP11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 OR51I1Q9H343 314 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 GRPEL1Q9HAV7 217 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 DYNLRB1Q9NP97 96 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 EXOSC3Q9NQT5 275 aaKnown RBP11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 EXD2Q9NVH0 621 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 OSGIN1Q9UJX0 560 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 PCDHB10Q9UN67 800 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 SPEF1Q9Y4P9 236 aa11.09□□□□□ -0.63
TRAPPC12-216ENST00000469400 PKD1L1Q8TDX9 2849 aa11.08□□□□□ -0.64
TRAPPC12-216ENST00000469400 A0A096LPE4 126 aa11.08□□□□□ -0.64
TRAPPC12-216ENST00000469400 A0A1W2PPZ6 126 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms