RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 A0A1W2PPZ6 126 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 TPD52L2O43399 206 aaKnown RBP9.83□□□□□ -0.84
VPS26A-204ENST00000467852 LGI1O95970 557 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 LYL1P12980 280 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 CD1DP15813 335 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 GLRXP35754 106 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 ARR3P36575 388 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 KCNJ1P48048 391 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 BPIFB3P59826 476 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 ATP6V0D1P61421 351 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 RPS23P62266 143 aaKnown RBP9.83□□□□□ -0.84
VPS26A-204ENST00000467852 NPRL3Q12980 569 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 KCTD19Q17RG1 926 aaPredicted RBP9.83□□□□□ -0.84
VPS26A-204ENST00000467852 NKPD1Q17RQ9 610 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 SLC25A53Q5H9E4 307 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 BRD3OSQ6XYD6 125 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 MYPOPQ86VE0 399 aaPredicted RBP9.83□□□□□ -0.84
VPS26A-204ENST00000467852 LRP11Q86VZ4 500 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 CCDC103Q8IW40 242 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 C1orf174Q8IYL3 243 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 BCL2L2Q92843 193 aaPredicted RBP9.83□□□□□ -0.84
VPS26A-204ENST00000467852 UPRTQ96BW1 309 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 DIRC2Q96SL1 478 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 VPS11Q9H270 941 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 SLC35C2Q9NQQ7 365 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 NUDT4Q9NZJ9 180 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 ACOT9Q9Y305 439 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 RNF11Q9Y3C5 154 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 FLVCR1Q9Y5Y0 555 aa9.83□□□□□ -0.84
VPS26A-204ENST00000467852 A0A096LPK6 155 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 ZNF816-ZNF321PA0A0X1KG74 233 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 C17orf100A8MU93 164 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 ZNF587BE7ETH6 402 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 UPK1AO00322 258 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 F13BP05160 661 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 TFPIP10646 304 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 LCN1P31025 176 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 CD80P33681 288 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 ALKBH6Q3KRA9 238 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 TIGD2Q4W5G0 525 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 SYT14P1Q58G82 188 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 GKAP1Q5VSY0 366 aaPredicted RBP9.82□□□□□ -0.84
VPS26A-204ENST00000467852 FRG2Q64ET8 278 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 TTC19Q6DKK2 380 aaPredicted RBP9.82□□□□□ -0.84
VPS26A-204ENST00000467852 CBLN3Q6UW01 205 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 TMEM107Q6UX40 140 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 GDPGP1Q6ZNW5 385 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 USP51Q70EK9 711 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 OR6Y1Q8NGX8 325 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 UBTD2Q8WUN7 234 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 AURKBQ96GD4 344 aaPredicted RBP9.82□□□□□ -0.84
VPS26A-204ENST00000467852 TRIM5Q9C035 493 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 MYEF2Q9P2K5 600 aaKnown RBP9.82□□□□□ -0.84
VPS26A-204ENST00000467852 IL20RAQ9UHF4 553 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 RPUSD1Q9UJJ7 312 aaKnown RBP9.82□□□□□ -0.84
VPS26A-204ENST00000467852 CARD8Q9Y2G2 431 aa9.82□□□□□ -0.84
VPS26A-204ENST00000467852 SUPT3HB4E1H0 165 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 GTPBP1O00178 669 aaKnown RBP9.81□□□□□ -0.84
VPS26A-204ENST00000467852 DNPH1O43598 174 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 SUPT3HO75486 399 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 PSMG1O95456 288 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 PMS2P2O95744 297 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 ARL1P40616 181 aaPredicted RBP9.81□□□□□ -0.84
VPS26A-204ENST00000467852 EMX1Q04741 257 aaPredicted RBP9.81□□□□□ -0.84
VPS26A-204ENST00000467852 SLC3A1Q07837 685 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 LCP2Q13094 533 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 VPS26BQ4G0F5 336 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 PAQR6Q6TCH4 344 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 BTNL3Q6UXE8 466 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 LRRN1Q6UXK5 716 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 AAED1Q7RTV5 226 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 ZC3HC1Q86WB0 502 aaKnown RBP9.81□□□□□ -0.84
VPS26A-204ENST00000467852 OR2L13Q8N349 312 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 C11orf44Q8N8P7 122 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 L3MBTL4Q8NA19 623 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 RFWD2Q8NHY2 731 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 SLC25A43Q8WUT9 341 aaPredicted RBP9.81□□□□□ -0.84
VPS26A-204ENST00000467852 SNX33Q8WV41 574 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 C16orf58Q96GQ5 468 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 HES6Q96HZ4 224 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 TOR3AQ9H497 397 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 ACSS3Q9H6R3 686 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 HINT3Q9NQE9 182 aaKnown RBP9.81□□□□□ -0.84
VPS26A-204ENST00000467852 NKIRAS2Q9NYR9 191 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 OR5V1Q9UGF6 321 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 FZR1Q9UM11 496 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 SLC12A4Q9UP95 1085 aa9.81□□□□□ -0.84
VPS26A-204ENST00000467852 POC1B-GALNT4F8VUJ3 575 aa9.8□□□□□ -0.84
VPS26A-204ENST00000467852 H3BNH8 94 aa9.8□□□□□ -0.84
VPS26A-204ENST00000467852 TSPAN9O75954 239 aa9.8□□□□□ -0.84
VPS26A-204ENST00000467852 JUNP05412 331 aaKnown RBP9.8□□□□□ -0.84
VPS26A-204ENST00000467852 IL3P08700 152 aa9.8□□□□□ -0.84
VPS26A-204ENST00000467852 IGLL1P15814 213 aa9.8□□□□□ -0.84
VPS26A-204ENST00000467852 CD33P20138 364 aa9.8□□□□□ -0.84
VPS26A-204ENST00000467852 ASMTP46597 345 aa9.8□□□□□ -0.84
VPS26A-204ENST00000467852 NCBP2P52298 156 aaKnown RBP eCLIP9.8□□□□□ -0.843e-6■■□□□ 12.9
VPS26A-204ENST00000467852 SELENOVP59797 346 aa9.8□□□□□ -0.84
VPS26A-204ENST00000467852 GALNT1Q10472 559 aaPredicted RBP9.8□□□□□ -0.84
VPS26A-204ENST00000467852 QPRTQ15274 297 aa9.8□□□□□ -0.84
VPS26A-204ENST00000467852 GPR157Q5UAW9 335 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms