RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 RIBC1Q8N443 379 aaPredicted RBP8.51□□□□□ -1.05
USP39-212ENST00000465514 FAM71CQ8NEG0 241 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 PIGXQ8TBF5 258 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 MIPOL1Q8TD10 442 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 RAB8BQ92930 207 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 ZG16BQ96DA0 208 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 ZHX1-C8orf76Q96EF9 292 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 PPP1R36Q96LQ0 422 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 FOXN4Q96NZ1 517 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 RBM4Q9BWF3 364 aaKnown RBP8.51□□□□□ -1.05
USP39-212ENST00000465514 C1QTNF6Q9BXI9 259 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 OR11A1Q9GZK7 315 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 ASB6Q9NWX5 421 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 ASIC5Q9NY37 505 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 CHRNA9Q9UGM1 479 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 LGALS13Q9UHV8 139 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 POU2F3Q9UKI9 436 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 PCDHGB4Q9UN71 923 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 SLC35A3Q9Y2D2 325 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 HDGFL3Q9Y3E1 203 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 WDR45Q9Y484 360 aa8.51□□□□□ -1.05
USP39-212ENST00000465514 SPIN1Q9Y657 262 aaPredicted RBP8.51□□□□□ -1.05
USP39-212ENST00000465514 PRSS51A0A1B0GVH4 220 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 LRP5LA4QPB2 252 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 M0R1B8 84 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 ITM2AO43736 263 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 SCN2BO60939 215 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 MRPL33O75394 65 aaKnown RBP8.5□□□□□ -1.05
USP39-212ENST00000465514 AGR2O95994 175 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 GUSBP08236 651 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 ITGA5P08648 1049 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 NUDT17P0C025 328 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 DHRS4L1P0CG22 281 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 CCNA2P20248 432 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 UQCRC2P22695 453 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 FKBP2P26885 142 aaKnown RBP8.5□□□□□ -1.05
USP39-212ENST00000465514 IL2RGP31785 369 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 CLK1P49759 484 aaKnown RBP8.5□□□□□ -1.05
USP39-212ENST00000465514 SLC16A1P53985 500 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 OR2B6P58173 313 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 HILS1P60008 231 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 PHC1P78364 1004 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 KCNJ10P78508 379 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 FUT5Q11128 374 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 GABRA6Q16445 453 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 SMU1Q2TAY7 513 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 AP1ARQ63HQ0 302 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 OR7E24Q6IFN5 339 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 EMBQ6PCB8 327 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 B3GLCTQ6Y288 498 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 DEF8Q6ZN54 512 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 FRRS1Q6ZNA5 592 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 GRINAQ7Z429 371 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 ANKRD46Q86W74 232 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 LSRQ86X29 649 aaPredicted RBP8.5□□□□□ -1.05
USP39-212ENST00000465514 NUDCD3Q8IVD9 361 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 ARFGAP2Q8N6H7 521 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 OR8J2Q8NGG1 315 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 OR52E4Q8NGH9 312 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 ZNF418Q8TF45 676 aaPredicted RBP8.5□□□□□ -1.05
USP39-212ENST00000465514 OIT3Q8WWZ8 545 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.5□□□□□ -1.05
USP39-212ENST00000465514 ROPN1LQ96C74 230 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 MUS81Q96NY9 551 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 DPY30Q9C005 99 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 SAP130Q9H0E3 1048 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 AKTIPQ9H8T0 292 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 POLE3Q9NRF9 147 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.5□□□□□ -1.05
USP39-212ENST00000465514 TAS2R16Q9NYV7 291 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 MALT1Q9UDY8 824 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 TRAPPC4Q9Y296 219 aa8.5□□□□□ -1.05
USP39-212ENST00000465514 TMED7-TICAM2A0A0A6YYA0 188 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 PRAMEF27A3QJZ7 478 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 CLDN24A6NM45 220 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 DNPH1O43598 174 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 C1QCP02747 245 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 ETV4P43268 484 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 MAGEA8P43361 318 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 IDH2P48735 452 aaKnown RBP8.49□□□□□ -1.05
USP39-212ENST00000465514 KHKP50053 298 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 H3F3AP84243 136 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 PLAURQ03405 335 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 IFFO1Q0D2I5 559 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 GPAT3Q53EU6 434 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 ANXA8L1Q5VT79 327 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 C9orf135Q5VTT2 229 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 SAXO2Q658L1 398 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 ZNF544Q6NX49 715 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 CASP12Q6UXS9 341 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 WDR31Q8NA23 367 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 VPS37AQ8NEZ2 397 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 CNOT9Q92600 299 aaKnown RBP8.49□□□□□ -1.05
USP39-212ENST00000465514 MRPL24Q96A35 216 aaKnown RBP8.49□□□□□ -1.05
USP39-212ENST00000465514 NEURL3Q96EH8 262 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 PKNOX2Q96KN3 472 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 ZIM3Q96PE6 472 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 INPP5KQ9BT40 448 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 BPESC1Q9GZL8 116 aa8.49□□□□□ -1.05
USP39-212ENST00000465514 EXOSC3Q9NQT5 275 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms