RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 DTNBP1Q96EV8 351 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 KCNS3Q9BQ31 491 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 KATNB1Q9BVA0 655 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 SLC19A3Q9BZV2 496 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 MMP25Q9NPA2 562 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 SMIM30A4D0T7 59 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 SLC22A31A6NKX4 558 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 ZNF670-ZNF695F2Z2N8 137 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 DVL2O14641 736 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 PPM1BO75688 479 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 SERPINI2O75830 405 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 NUDT14O95848 222 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 CELP19835 753 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 SSX6Q7RTT6 188 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 C17orf47Q8NEP4 570 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 DUSP19Q8WTR2 217 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 TAAR8Q969N4 342 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 ZMYND19Q96E35 227 aaPredicted RBP11.67□□□□□ -0.54
VAPB-203ENST00000463370 C1GALT1C1Q96EU7 318 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 NPAS1Q99742 590 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 TMEM43Q9BTV4 400 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 CRB3Q9BUF7 120 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 ALG8Q9BVK2 526 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 JAM3Q9BX67 310 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 TTTY10Q9BZA0 68 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 WDR12Q9GZL7 423 aaKnown RBP11.67□□□□□ -0.54
VAPB-203ENST00000463370 TPK1Q9H3S4 243 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 NRIP3Q9NQ35 241 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 SNTG1Q9NSN8 517 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 SSR3Q9UNL2 185 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 BAIAP2Q9UQB8 552 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 HRH3Q9Y5N1 445 aa11.67□□□□□ -0.54
VAPB-203ENST00000463370 TRBV11-1A0A0K0K1C0 115 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 A0A1W2PQD3 144 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 OR6C68A6NDL8 312 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 CTDSP2O14595 271 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 SBK2P0C263 348 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 FGF5P12034 268 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 RPS5P46782 204 aaKnown RBP11.66□□□□□ -0.54
VAPB-203ENST00000463370 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.66□□□□□ -0.54
VAPB-203ENST00000463370 BICRALQ6AI39 1079 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 MRPL14Q6P1L8 145 aaKnown RBP11.66□□□□□ -0.54
VAPB-203ENST00000463370 LYPD4Q6UWN0 246 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 DPY19L2P2Q6ZN68 376 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 NPEPL1Q8NDH3 523 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 OR52N1Q8NH53 320 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 METTL21AQ8WXB1 218 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 DDOQ99489 341 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 TMED9Q9BVK6 235 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 NANSQ9NR45 359 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 FBXO4Q9UKT5 387 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 NPFFR2Q9Y5X5 522 aa11.66□□□□□ -0.54
VAPB-203ENST00000463370 COL5A1P20908 1838 aaPredicted RBP11.66□□□□□ -0.54
VAPB-203ENST00000463370 E9PI62 339 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 MAGEB4O15481 346 aaPredicted RBP11.65□□□□□ -0.54
VAPB-203ENST00000463370 ONECUT2O95948 504 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 F13BP05160 661 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 ASAH2BP0C7U1 165 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 ZFP36L1Q07352 338 aaKnown RBP11.65□□□□□ -0.54
VAPB-203ENST00000463370 TMED1Q13445 227 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 ATP1A4Q13733 1029 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 CRTC2Q53ET0 693 aaPredicted RBP11.65□□□□□ -0.54
VAPB-203ENST00000463370 GDPGP1Q6ZNW5 385 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 LRRC75AQ8NAA5 344 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 C7orf57Q8NEG2 295 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 OR5W2Q8NH69 310 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 S100ZQ8WXG8 99 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 Q96M85 177 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 LPAR4Q99677 370 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 HDHD5Q9BXW7 423 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 ARRDC1-AS1Q9H2J1 176 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 CCDC86Q9H6F5 360 aaKnown RBP11.65□□□□□ -0.54
VAPB-203ENST00000463370 GALNT9Q9HCQ5 603 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 ISYNA1Q9NPH2 558 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 ASB6Q9NWX5 421 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 ZNF346Q9UL40 294 aaKnown RBP11.65□□□□□ -0.54
VAPB-203ENST00000463370 ZMIZ1Q9ULJ6 1067 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 TEX13CA0A0J9YWL9 993 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 DAPL1A0PJW8 107 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 OR6C70A6NIJ9 312 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 CDC40O60508 579 aaKnown RBP eCLIP11.65□□□□□ -0.54
VAPB-203ENST00000463370 CDRT1O95170 752 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 IFNGP01579 166 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 TFP02787 698 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 LCN1P31025 176 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 GABRA5P31644 462 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 ZNF85Q03923 595 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 CPEB2Q7Z5Q1 589 aaKnown RBP11.65□□□□□ -0.54
VAPB-203ENST00000463370 ARIH2OSQ8N7S6 290 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 ZBTB44Q8NCP5 570 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 NLGN4YQ8NFZ3 816 aaPredicted RBP11.65□□□□□ -0.54
VAPB-203ENST00000463370 SMPDL3BQ92485 455 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 PALMDQ9NP74 551 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 PPIEQ9UNP9 301 aaKnown RBP11.65□□□□□ -0.54
VAPB-203ENST00000463370 HIF3AQ9Y2N7 669 aa11.65□□□□□ -0.54
VAPB-203ENST00000463370 NCOR1O75376 2440 aa11.65□□□□□ -0.55
VAPB-203ENST00000463370 CELSR3Q9NYQ7 3312 aa11.65□□□□□ -0.55
VAPB-203ENST00000463370 A0A1W2PQL4 384 aaPredicted RBP11.64□□□□□ -0.55
VAPB-203ENST00000463370 FAM171A2A8MVW0 826 aa11.64□□□□□ -0.55
VAPB-203ENST00000463370 SULT1C4O75897 302 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms