RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 HDGFL3Q9Y3E1 203 aa6.64□□□□□ -1.35
SMC3-202ENST00000462899 GRIP1Q9Y3R0 1128 aa6.64□□□□□ -1.35
SMC3-202ENST00000462899 KCNE3Q9Y6H6 103 aa6.64□□□□□ -1.35
SMC3-202ENST00000462899 TRAV20A0A0B4J274 112 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 H3BNH8 94 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 KLF11O14901 512 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 RAD51CO43502 376 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 BCAS1O75363 584 aaPredicted RBP6.63□□□□□ -1.35
SMC3-202ENST00000462899 RP2O75695 350 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 SUPT7LO94864 414 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 CRYAAP02489 173 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 SAGP10523 405 aaPredicted RBP6.63□□□□□ -1.35
SMC3-202ENST00000462899 UBL4AP11441 157 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 PAX7P23759 505 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 THBS4P35443 961 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 PKNOX1P55347 436 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 TGFBR3Q03167 851 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 LASP1Q14847 261 aaKnown RBP6.63□□□□□ -1.35
SMC3-202ENST00000462899 ZNF141Q15928 474 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 ADRM1Q16186 407 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 TBRG1Q3YBR2 411 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 PDZK1Q5T2W1 519 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 ANKRD16Q6P6B7 361 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 LINGO2Q7L985 606 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 OR4F15Q8NGB8 312 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 OR1K1Q8NGR3 316 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 OR51F2Q8NH61 342 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 ZFP28Q8NHY6 868 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 MAGEE2Q8TD90 523 aaPredicted RBP6.63□□□□□ -1.35
SMC3-202ENST00000462899 MRRFQ96E11 262 aaKnown RBP6.63□□□□□ -1.35
SMC3-202ENST00000462899 L3HYPDHQ96EM0 354 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 METTL2AQ96IZ6 378 aaKnown RBP6.63□□□□□ -1.35
SMC3-202ENST00000462899 THUMPD3Q9BV44 507 aaKnown RBP6.63□□□□□ -1.35
SMC3-202ENST00000462899 NMUR2Q9GZQ4 415 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 LPAR2Q9HBW0 351 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 TNFRSF12AQ9NP84 129 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 CHRNA9Q9UGM1 479 aa6.63□□□□□ -1.35
SMC3-202ENST00000462899 DNAH9Q9NYC9 4486 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 IGHV2OR16-5A0A0B4J2B6 119 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 ZNF503-AS2A6NEH8 195 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 FBXO24O75426 580 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 HPXP02790 462 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 CELA3BP08861 270 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 IMPDH2P12268 514 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 DDX5P17844 614 aaKnown RBP6.62□□□□□ -1.35
SMC3-202ENST00000462899 SDC1P18827 310 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 NPR2P20594 1047 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 IMPDH1P20839 514 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 ACHEP22303 614 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 COL8A2P25067 703 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 PGM1P36871 562 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 APOBEC1P41238 236 aaKnown RBP6.62□□□□□ -1.35
SMC3-202ENST00000462899 SLC1A3P43003 542 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 MAGEA8P43361 318 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 CLK1P49759 484 aaKnown RBP6.62□□□□□ -1.35
SMC3-202ENST00000462899 P2RY4P51582 365 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 PLTPP55058 493 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 IL1RL1Q01638 556 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 MERTKQ12866 999 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 SLC9B1Q4ZJI4 515 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 ATP6AP1LQ52LC2 224 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 NKAPLQ5M9Q1 402 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 SPDYAQ5MJ70 313 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 SHQ1Q6PI26 577 aaKnown RBP6.62□□□□□ -1.35
SMC3-202ENST00000462899 VHLLQ6RSH7 139 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 SZRD1Q7Z422 152 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 ADGRG3Q86Y34 549 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 TEX29Q8N6K0 151 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 TMCO5AQ8N6Q1 288 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 RFWD2Q8NHY2 731 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 CKAP2Q8WWK9 683 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 BCL2L2Q92843 193 aaPredicted RBP6.62□□□□□ -1.35
SMC3-202ENST00000462899 YIPF5Q969M3 257 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 ZHX1-C8orf76Q96EF9 292 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 ZNF385AQ96PM9 386 aaKnown RBP6.62□□□□□ -1.35
SMC3-202ENST00000462899 ZNF317Q96PQ6 595 aaPredicted RBP6.62□□□□□ -1.35
SMC3-202ENST00000462899 CCT7Q99832 543 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 OR11A1Q9GZK7 315 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 SLITRK2Q9H156 845 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 TPK1Q9H3S4 243 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 SERHL2Q9H4I8 314 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 REEP4Q9H6H4 257 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 UNKLQ9H9P5 680 aaKnown RBP6.62□□□□□ -1.35
SMC3-202ENST00000462899 CTPS2Q9NRF8 586 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 SERINC1Q9NRX5 453 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 ZCCHC3Q9NUD5 404 aaKnown RBP6.62□□□□□ -1.35
SMC3-202ENST00000462899 PARPBPQ9NWS1 579 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 UPB1Q9UBR1 384 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 OPN4Q9UHM6 478 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 TRAPPC4Q9Y296 219 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 STK38LQ9Y2H1 464 aa6.62□□□□□ -1.35
SMC3-202ENST00000462899 TENM3Q9P273 2699 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 GTPBP1O00178 669 aaKnown RBP6.61□□□□□ -1.35
SMC3-202ENST00000462899 NR5A2O00482 541 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 UGT2B17O75795 530 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 NCR1O76036 304 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 ERCC1P07992 297 aaPredicted RBP6.61□□□□□ -1.35
SMC3-202ENST00000462899 ADRA2AP08913 450 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 ADRA2CP18825 462 aa6.61□□□□□ -1.35
SMC3-202ENST00000462899 EFNA1P20827 205 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms