RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 SLX4IPQ5VYV7 408 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 RNF165Q6ZSG1 346 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 OR2T27Q8NH04 317 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 TMEM255BQ8WV15 326 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 FN3KQ9H479 309 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 PAPLNO95428 1278 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 LSAMPQ13449 338 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 SMN1Q16637 294 aaKnown RBP16.32■□□□□ 0.2
CHRD-208ENST00000460627 RNASE10Q5GAN6 216 aaKnown RBP16.32■□□□□ 0.2
CHRD-208ENST00000460627 ATAD3CQ5T2N8 411 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 AWAT2Q6E213 333 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 BORAQ6PGQ7 559 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 CPEB2Q7Z5Q1 589 aaKnown RBP16.32■□□□□ 0.2
CHRD-208ENST00000460627 KLHDC8BQ8IXV7 354 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 GDPD1Q8N9F7 314 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 THAP6Q8TBB0 222 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 ZNF419Q96HQ0 510 aaPredicted RBP16.32■□□□□ 0.2
CHRD-208ENST00000460627 PHOX2BQ99453 314 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 ALG12Q9BV10 488 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 UBAP1Q9NZ09 502 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 FOCADQ5VW36 1801 aa16.32■□□□□ 0.2
CHRD-208ENST00000460627 TMEM269A0A1B0GVZ9 245 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 H3BMQ9 156 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 RRP8O43159 456 aaKnown RBP16.31■□□□□ 0.2
CHRD-208ENST00000460627 PRR35P0CG20 571 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 IRF2P14316 349 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 ABOP16442 354 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 AMY2BP19961 511 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 DGLUCYQ7Z3D6 616 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 IQCF2Q8IXL9 164 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 ADGRF3Q8IZF5 1079 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 COG8Q96MW5 612 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 PMF1-BGLAPU3KQ54 211 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 A0A1W2PQL4 384 aaPredicted RBP16.31■□□□□ 0.2
CHRD-208ENST00000460627 KDM4EB2RXH2 506 aaPredicted RBP16.31■□□□□ 0.2
CHRD-208ENST00000460627 WDPCPO95876 746 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 C1QAP02745 245 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 CHRM4P08173 479 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 PSMB10P40306 273 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 PGBD2Q6P3X8 592 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 CENPSQ8N2Z9 138 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 CNEP1R1Q8N9A8 125 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 OR5J2Q8NH18 312 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 CNRIP1Q96F85 164 aaPredicted RBP16.31■□□□□ 0.2
CHRD-208ENST00000460627 CCDC74BQ96LY2 380 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 OR51E2Q9H255 320 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 RGPD3A6NKT7 1758 aaPredicted RBP16.31■□□□□ 0.2
CHRD-208ENST00000460627 CASP8AP2Q9UKL3 1982 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 KCNK2O95069 426 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 KIR2DL1P43626 348 aaPredicted RBP16.31■□□□□ 0.2
CHRD-208ENST00000460627 CRMP1Q14194 572 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 EIF5AL1Q6IS14 154 aaKnown RBP16.31■□□□□ 0.2
CHRD-208ENST00000460627 RPL22L1Q6P5R6 122 aaKnown RBP16.31■□□□□ 0.2
CHRD-208ENST00000460627 CARFQ8N187 725 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 SLC7A13Q8TCU3 470 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 NUDT22Q9BRQ3 303 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 CABIN1Q9Y6J0 2220 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 METTL15A6NJ78 407 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 G3V3Y1 287 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 GCH1P30793 250 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 BTG2P78543 158 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 DNASE1L3Q13609 305 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 KDM4DQ6B0I6 523 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 ZNF547Q8IVP9 402 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 ZNF454Q8N9F8 522 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 OR5D14Q8NGL3 314 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 TRMT10AQ8TBZ6 339 aaKnown RBP16.31■□□□□ 0.2
CHRD-208ENST00000460627 TSLPQ969D9 159 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 OR2A14Q96R47 310 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 ELOVL3Q9HB03 270 aa16.31■□□□□ 0.2
CHRD-208ENST00000460627 AGAP14A8MT82 685 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 MEN1O00255 615 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 UPK1AO00322 258 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 HOXB9P17482 250 aaPredicted RBP16.3■□□□□ 0.2
CHRD-208ENST00000460627 RAB3AP20336 220 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 NXPH1P58417 271 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 FXYD6P3P58550 94 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 FOXK2Q01167 660 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 TRA2AQ13595 282 aaKnown RBP eCLIP16.3■□□□□ 0.2
CHRD-208ENST00000460627 GXYLT1Q4G148 440 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 NHSL2Q5HYW2 709 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 C1orf140Q5VVS0 124 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 C16orf52Q8NHV5 167 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 A0A0A6YYD5 115 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 OR7A10O76100 309 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 YES1P07947 543 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 LCN1P31025 176 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 HES5Q5TA89 166 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 OR5L1Q8NGL2 311 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 NIPSNAP1Q9BPW8 284 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 UBQLN3Q9H347 655 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 C1orf198Q9H425 327 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 PSORS1C1Q9UIG5 152 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 SHISA7A6NL88 538 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 MMP11P24347 488 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 PLEKHN1Q494U1 663 aaPredicted RBP16.3■□□□□ 0.2
CHRD-208ENST00000460627 OR7E24Q6IFN5 339 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 GRPEL2Q8TAA5 225 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 WDR34Q96EX3 536 aa16.3■□□□□ 0.2
CHRD-208ENST00000460627 SCN10AQ9Y5Y9 1956 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms