RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CHRNA9Q9UGM1 479 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 FBXL2Q9UKC9 423 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 HIF3AQ9Y2N7 669 aa22.13■■□□□ 1.13
U2AF1-204ENST00000459639 EFCAB10A6NFE3 127 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 MT-ATP6P00846 226 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 BGLAPP02818 100 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 P04436 131 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 RPS5P46782 204 aaKnown RBP22.12■■□□□ 1.13
U2AF1-204ENST00000459639 LTBQ06643 244 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 TMEM44Q2T9K0 475 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 VASH2Q86V25 355 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 THAP4Q8WY91 577 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 NXPE2Q96DL1 559 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 ZNF582Q96NG8 517 aaPredicted RBP22.12■■□□□ 1.13
U2AF1-204ENST00000459639 CCDC90BQ9GZT6 254 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 FAM192AQ9GZU8 254 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 FN3KQ9H479 309 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 SACM1LQ9NTJ5 587 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 STMN3Q9NZ72 180 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 PCDHGB1Q9Y5G3 927 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 CFAP54Q96N23 3096 aa22.12■■□□□ 1.13
U2AF1-204ENST00000459639 A0A087WZY1 265 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 ZC3H12DA2A288 527 aaKnown RBP22.11■■□□□ 1.13
U2AF1-204ENST00000459639 KDM4EB2RXH2 506 aaPredicted RBP22.11■■□□□ 1.13
U2AF1-204ENST00000459639 DLL1O00548 723 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 ZNF208O43345 1280 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 PIPP12273 146 aaPredicted RBP22.11■■□□□ 1.13
U2AF1-204ENST00000459639 JUNBP17275 347 aaPredicted RBP22.11■■□□□ 1.13
U2AF1-204ENST00000459639 SLC15A1P46059 708 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 GTF2A1P52655 376 aaPredicted RBP22.11■■□□□ 1.13
U2AF1-204ENST00000459639 MLLT10P55197 1068 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 RSPO4Q2I0M5 234 aaPredicted RBP22.11■■□□□ 1.13
U2AF1-204ENST00000459639 FAM69AQ5T7M9 428 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 C1orf140Q5VVS0 124 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 MDGA2Q7Z553 956 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 OR6S1Q8NH40 331 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 GPX7Q96SL4 187 aaPredicted RBP22.11■■□□□ 1.13
U2AF1-204ENST00000459639 PTDSS2Q9BVG9 487 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 CMC2Q9NRP2 79 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 GPR83Q9NYM4 423 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 NDUFA13Q9P0J0 144 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 GPR52Q9Y2T5 361 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 RPL36Q9Y3U8 105 aaKnown RBP22.11■■□□□ 1.13
U2AF1-204ENST00000459639 SMIM31A0A1B0GVY4 71 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 SNTNA6NMZ2 147 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 AHSA1O95433 338 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 PPP1R3DO95685 299 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 MT-ND2P03891 347 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 CASRP41180 1078 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 MASP1P48740 699 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 RRADP55042 308 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 FOXK2Q01167 660 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 ARHGAP11AQ6P4F7 1023 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 DPY19L2P2Q6ZN68 376 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 SVOPQ8N4V2 548 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 NPAS1Q99742 590 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 NDEL1Q9GZM8 345 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 WDR70Q9NW82 654 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 ANKRD10Q9NXR5 420 aa22.11■■□□□ 1.13
U2AF1-204ENST00000459639 PRODHO43272 600 aa22.1■■□□□ 1.13
U2AF1-204ENST00000459639 CDK1P06493 297 aa22.1■■□□□ 1.13
U2AF1-204ENST00000459639 TSPAN19P0C672 248 aa22.1■■□□□ 1.13
U2AF1-204ENST00000459639 PEPDP12955 493 aa22.1■■□□□ 1.13
U2AF1-204ENST00000459639 UQCRC1P31930 480 aa22.1■■□□□ 1.13
U2AF1-204ENST00000459639 EIF1P41567 113 aaKnown RBP22.1■■□□□ 1.13
U2AF1-204ENST00000459639 ZNF91Q05481 1191 aa22.1■■□□□ 1.13
U2AF1-204ENST00000459639 XAF1Q6GPH4 301 aa22.1■■□□□ 1.13
U2AF1-204ENST00000459639 NANOGNBQ7Z5D8 188 aa22.1■■□□□ 1.13
U2AF1-204ENST00000459639 ZNF227Q86WZ6 799 aa22.1■■□□□ 1.13
U2AF1-204ENST00000459639 PSD4Q8NDX1 1056 aa22.1■■□□□ 1.13
U2AF1-204ENST00000459639 ANKK1Q8NFD2 765 aa22.1■■□□□ 1.13
U2AF1-204ENST00000459639 OR1J4Q8NGS1 313 aa22.1■■□□□ 1.13
U2AF1-204ENST00000459639 POC1BQ8TC44 478 aa22.1■■□□□ 1.13
U2AF1-204ENST00000459639 ZBTB8AQ96BR9 441 aa22.1■■□□□ 1.13
U2AF1-204ENST00000459639 MCIDASD6RGH6 385 aa22.09■■□□□ 1.13
U2AF1-204ENST00000459639 CDK2AP1O14519 115 aa22.09■■□□□ 1.13
U2AF1-204ENST00000459639 OR2T1O43869 369 aa22.09■■□□□ 1.13
U2AF1-204ENST00000459639 HIST1H2ABP04908 130 aa22.09■■□□□ 1.13
U2AF1-204ENST00000459639 DBTP11182 482 aaKnown RBP22.09■■□□□ 1.13
U2AF1-204ENST00000459639 PCMT1P22061 227 aa22.09■■□□□ 1.13
U2AF1-204ENST00000459639 ADH6P28332 368 aa22.09■■□□□ 1.13
U2AF1-204ENST00000459639 OC90Q02509 493 aaPredicted RBP22.09■■□□□ 1.13
U2AF1-204ENST00000459639 NEDD8Q15843 81 aa22.09■■□□□ 1.13
U2AF1-204ENST00000459639 ATP1A1-AS1Q5TC04 95 aa22.09■■□□□ 1.13
U2AF1-204ENST00000459639 C1QL3Q5VWW1 255 aa22.09■■□□□ 1.13
U2AF1-204ENST00000459639 HIST3H2AQ7L7L0 130 aa22.09■■□□□ 1.13
U2AF1-204ENST00000459639 MAMDC2Q7Z304 686 aaPredicted RBP22.09■■□□□ 1.13
U2AF1-204ENST00000459639 BCDIN3DQ7Z5W3 292 aaKnown RBP22.09■■□□□ 1.13
U2AF1-204ENST00000459639 HIST1H2ACQ93077 130 aa22.09■■□□□ 1.13
U2AF1-204ENST00000459639 DDIT4LQ96D03 193 aa22.09■■□□□ 1.13
U2AF1-204ENST00000459639 RIIAD1A6NNX1 92 aa22.08■■□□□ 1.13
U2AF1-204ENST00000459639 TRIM3O75382 744 aaPredicted RBP22.08■■□□□ 1.13
U2AF1-204ENST00000459639 SLC2A10O95528 541 aa22.08■■□□□ 1.13
U2AF1-204ENST00000459639 RPL4P36578 427 aaKnown RBP22.08■■□□□ 1.13
U2AF1-204ENST00000459639 MVKQ03426 396 aa22.08■■□□□ 1.13
U2AF1-204ENST00000459639 TBC1D25Q3MII6 688 aa22.08■■□□□ 1.13
U2AF1-204ENST00000459639 AADACL4Q5VUY2 407 aa22.08■■□□□ 1.13
U2AF1-204ENST00000459639 NXNL2Q5VZ03 156 aa22.08■■□□□ 1.13
U2AF1-204ENST00000459639 TIGD3Q6B0B8 471 aa22.08■■□□□ 1.13
U2AF1-204ENST00000459639 STX19Q8N4C7 294 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms