RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 BIRC5O15392 142 aa18.87■□□□□ 0.61
CPNE1-220ENST00000458038 THBS2P35442 1172 aa18.87■□□□□ 0.61
CPNE1-220ENST00000458038 PRPS1P60891 318 aa18.87■□□□□ 0.61
CPNE1-220ENST00000458038 ABCE1P61221 599 aaKnown RBP18.87■□□□□ 0.61
CPNE1-220ENST00000458038 PHC1P78364 1004 aa18.87■□□□□ 0.61
CPNE1-220ENST00000458038 LRRC74AQ0VAA2 488 aa18.87■□□□□ 0.61
CPNE1-220ENST00000458038 GSTA3Q16772 222 aa18.87■□□□□ 0.61
CPNE1-220ENST00000458038 B3GLCTQ6Y288 498 aa18.87■□□□□ 0.61
CPNE1-220ENST00000458038 ZNF440Q8IYI8 595 aa18.87■□□□□ 0.61
CPNE1-220ENST00000458038 POMGNT2Q8NAT1 580 aa18.87■□□□□ 0.61
CPNE1-220ENST00000458038 OR52E4Q8NGH9 312 aa18.87■□□□□ 0.61
CPNE1-220ENST00000458038 CNOT9Q92600 299 aaKnown RBP18.87■□□□□ 0.61
CPNE1-220ENST00000458038 TMEM45BQ96B21 275 aa18.87■□□□□ 0.61
CPNE1-220ENST00000458038 CCDC115Q96NT0 180 aa18.87■□□□□ 0.61
CPNE1-220ENST00000458038 SLC7A10Q9NS82 523 aa18.87■□□□□ 0.61
CPNE1-220ENST00000458038 F12P00748 615 aaPredicted RBP18.86■□□□□ 0.61
CPNE1-220ENST00000458038 USF1P22415 310 aaPredicted RBP18.86■□□□□ 0.61
CPNE1-220ENST00000458038 S100A3P33764 101 aa18.86■□□□□ 0.61
CPNE1-220ENST00000458038 RPL14P50914 215 aaKnown RBP18.86■□□□□ 0.61
CPNE1-220ENST00000458038 KLHL24Q6TFL4 600 aa18.86■□□□□ 0.61
CPNE1-220ENST00000458038 LRRC74BQ6ZQY2 392 aa18.86■□□□□ 0.61
CPNE1-220ENST00000458038 ZNF781Q8N8C0 355 aa18.86■□□□□ 0.61
CPNE1-220ENST00000458038 TMEM109Q9BVC6 243 aa18.86■□□□□ 0.61
CPNE1-220ENST00000458038 SF3B5Q9BWJ5 86 aaKnown RBP18.86■□□□□ 0.61
CPNE1-220ENST00000458038 C1QTNF6Q9BXI9 259 aa18.86■□□□□ 0.61
CPNE1-220ENST00000458038 OBP2BQ9NPH6 170 aa18.86■□□□□ 0.61
CPNE1-220ENST00000458038 E9PBE3 544 aa18.85■□□□□ 0.61
CPNE1-220ENST00000458038 ITM2AO43736 263 aa18.85■□□□□ 0.61
CPNE1-220ENST00000458038 GPIP06744 558 aa18.85■□□□□ 0.61
CPNE1-220ENST00000458038 CREB1P16220 341 aa18.85■□□□□ 0.61
CPNE1-220ENST00000458038 IL7RP16871 459 aa18.85■□□□□ 0.61
CPNE1-220ENST00000458038 LBPP18428 481 aa18.85■□□□□ 0.61
CPNE1-220ENST00000458038 CCNA2P20248 432 aa18.85■□□□□ 0.61
CPNE1-220ENST00000458038 TACR3P29371 465 aa18.85■□□□□ 0.61
CPNE1-220ENST00000458038 FOXG1P55316 489 aaPredicted RBP18.85■□□□□ 0.61
CPNE1-220ENST00000458038 SPANXN4Q5MJ08 99 aa18.85■□□□□ 0.61
CPNE1-220ENST00000458038 TSPO2Q5TGU0 170 aa18.85■□□□□ 0.61
CPNE1-220ENST00000458038 DNAJA3Q96EY1 480 aa18.85■□□□□ 0.61
CPNE1-220ENST00000458038 PPP1R36Q96LQ0 422 aa18.85■□□□□ 0.61
CPNE1-220ENST00000458038 SLC38A1Q9H2H9 487 aa18.85■□□□□ 0.61
CPNE1-220ENST00000458038 NBEAL1Q6ZS30 2694 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 TMEM72A0PK05 275 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 PRAMEF27A3QJZ7 478 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 CFAP73A6NFT4 308 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 CLDN24A6NM45 220 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 NDUFS8O00217 210 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 PHF1O43189 567 aaPredicted RBP18.84■□□□□ 0.61
CPNE1-220ENST00000458038 DBIP07108 87 aaKnown RBP18.84■□□□□ 0.61
CPNE1-220ENST00000458038 IMPDH2P12268 514 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 GZMKP49863 264 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 LSM11P83369 360 aaKnown RBP eCLIP18.84■□□□□ 0.61
CPNE1-220ENST00000458038 PLAURQ03405 335 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 CHI3L2Q15782 390 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 FAM174BQ3ZCQ3 159 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 WDR60Q8WVS4 1066 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 ADAM19Q9H013 955 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 SHARPINQ9H0F6 387 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 SSU72Q9NP77 194 aaKnown RBP18.84■□□□□ 0.61
CPNE1-220ENST00000458038 HAO1Q9UJM8 370 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 FKBP7Q9Y680 259 aa18.84■□□□□ 0.61
CPNE1-220ENST00000458038 CCDC154A6NI56 674 aa18.83■□□□□ 0.6
CPNE1-220ENST00000458038 OR6C65A6NJZ3 312 aa18.83■□□□□ 0.6
CPNE1-220ENST00000458038 AP3D1O14617 1153 aa18.83■□□□□ 0.6
CPNE1-220ENST00000458038 RPS4Y1P22090 263 aaKnown RBP18.83■□□□□ 0.6
CPNE1-220ENST00000458038 CXCR1P25024 350 aa18.83■□□□□ 0.6
CPNE1-220ENST00000458038 EPS8Q12929 822 aa18.83■□□□□ 0.6
CPNE1-220ENST00000458038 SYPL1Q16563 259 aa18.83■□□□□ 0.6
CPNE1-220ENST00000458038 OTUD3Q5T2D3 398 aaPredicted RBP18.83■□□□□ 0.6
CPNE1-220ENST00000458038 C9orf135Q5VTT2 229 aa18.83■□□□□ 0.6
CPNE1-220ENST00000458038 OGFOD2Q6N063 350 aa18.83■□□□□ 0.6
CPNE1-220ENST00000458038 AAED1Q7RTV5 226 aa18.83■□□□□ 0.6
CPNE1-220ENST00000458038 RNF130Q86XS8 419 aa18.83■□□□□ 0.6
CPNE1-220ENST00000458038 PEX5LQ8IYB4 626 aa18.83■□□□□ 0.6
CPNE1-220ENST00000458038 ZNF317Q96PQ6 595 aaPredicted RBP18.83■□□□□ 0.6
CPNE1-220ENST00000458038 PANX1Q96RD7 426 aa18.83■□□□□ 0.6
CPNE1-220ENST00000458038 MANSC1Q9H8J5 431 aa18.83■□□□□ 0.6
CPNE1-220ENST00000458038 MOV10Q9HCE1 1003 aaKnown RBP18.83■□□□□ 0.6
CPNE1-220ENST00000458038 MYOZ1Q9NP98 299 aaPredicted RBP18.83■□□□□ 0.6
CPNE1-220ENST00000458038 FBXO9Q9UK97 447 aaPredicted RBP18.83■□□□□ 0.6
CPNE1-220ENST00000458038 TM9SF1O15321 606 aa18.82■□□□□ 0.6
CPNE1-220ENST00000458038 VAMP5O95183 116 aa18.82■□□□□ 0.6
CPNE1-220ENST00000458038 IGHV4-31P0DP07 118 aa18.82■□□□□ 0.6
CPNE1-220ENST00000458038 NR2F1P10589 423 aa18.82■□□□□ 0.6
CPNE1-220ENST00000458038 SLC1A6P48664 564 aa18.82■□□□□ 0.6
CPNE1-220ENST00000458038 PDLIM4P50479 330 aa18.82■□□□□ 0.6
CPNE1-220ENST00000458038 ZSWIM7Q19AV6 140 aa18.82■□□□□ 0.6
CPNE1-220ENST00000458038 SWI5Q1ZZU3 235 aa18.82■□□□□ 0.6
CPNE1-220ENST00000458038 HMGN2P46Q86SG4 172 aa18.82■□□□□ 0.6
CPNE1-220ENST00000458038 ANKFN1Q8N957 763 aa18.82■□□□□ 0.6
CPNE1-220ENST00000458038 OR9K2Q8NGE7 335 aa18.82■□□□□ 0.6
CPNE1-220ENST00000458038 NANOS1Q8WY41 292 aaKnown RBP18.82■□□□□ 0.6
CPNE1-220ENST00000458038 HTRA1Q92743 480 aa18.82■□□□□ 0.6
CPNE1-220ENST00000458038 PKNOX2Q96KN3 472 aa18.82■□□□□ 0.6
CPNE1-220ENST00000458038 KCNS3Q9BQ31 491 aa18.82■□□□□ 0.6
CPNE1-220ENST00000458038 TMEM45AQ9NWC5 275 aa18.82■□□□□ 0.6
CPNE1-220ENST00000458038 WDR91A4D1P6 747 aa18.81■□□□□ 0.6
CPNE1-220ENST00000458038 LIPT2A6NK58 231 aa18.81■□□□□ 0.6
CPNE1-220ENST00000458038 AQP7P3A6NL99 342 aa18.81■□□□□ 0.6
CPNE1-220ENST00000458038 LMX1BO60663 402 aa18.81■□□□□ 0.6
CPNE1-220ENST00000458038 KRT33AO76009 404 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms