RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 OR5AK3PQ8NH89 298 aa7.03□□□□□ -1.28
NIF3L1-209ENST00000454952 UBLCP1Q8WVY7 318 aaPredicted RBP7.03□□□□□ -1.28
NIF3L1-209ENST00000454952 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.03□□□□□ -1.28
NIF3L1-209ENST00000454952 TMEM45BQ96B21 275 aa7.03□□□□□ -1.28
NIF3L1-209ENST00000454952 TUBGCP3Q96CW5 907 aa7.03□□□□□ -1.28
NIF3L1-209ENST00000454952 APOPT1Q96IL0 206 aa7.03□□□□□ -1.28
NIF3L1-209ENST00000454952 C1orf50Q9BV19 199 aa7.03□□□□□ -1.28
NIF3L1-209ENST00000454952 C19orf24Q9BVV8 132 aa7.03□□□□□ -1.28
NIF3L1-209ENST00000454952 SF3B5Q9BWJ5 86 aaKnown RBP7.03□□□□□ -1.28
NIF3L1-209ENST00000454952 CTPS2Q9NRF8 586 aa7.03□□□□□ -1.28
NIF3L1-209ENST00000454952 ASIC5Q9NY37 505 aa7.03□□□□□ -1.28
NIF3L1-209ENST00000454952 MKLN1Q9UL63 735 aa7.03□□□□□ -1.28
NIF3L1-209ENST00000454952 SMIM23A6NLE4 172 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 VWC2LB2RUY7 222 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 TMEM233B4DJY2 109 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 PDLIM1O00151 329 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 FAAHO00519 579 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 FCMRO60667 390 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 KRT33AO76009 404 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 PDE5AO76074 875 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 SNUPNO95149 360 aaKnown RBP7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 CRYAAP02489 173 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 PGRP06401 933 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 CHRNGP07510 517 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 NUDT17P0C025 328 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 PCMT1P22061 227 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 UQCRC2P22695 453 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 ALDH3A1P30838 453 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 RYKP34925 604 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 SERPINF1P36955 418 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 NR4A2P43354 598 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 RPS26P62854 115 aaKnown RBP7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 KCNJ10P78508 379 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 H3F3AP84243 136 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 GGTLC2Q14390 218 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 DPY19L1Q2PZI1 675 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 C3orf36Q3SXR2 165 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 IQCCQ4KMZ1 466 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 FAM120AOSQ5T036 256 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 EMBQ6PCB8 327 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 PAQR6Q6TCH4 344 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 SLC46A3Q7Z3Q1 461 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 ADGRG3Q86Y34 549 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 ZNF440Q8IYI8 595 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 KRTCAP2Q8N6L1 136 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 WDR31Q8NA23 367 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 OR8J2Q8NGG1 315 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 OR52E4Q8NGH9 312 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 AGR3Q8TD06 166 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 XAGE5Q8WWM1 108 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 ZNF524Q96C55 264 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 ROPN1LQ96C74 230 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 BOD1Q96IK1 185 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 HSH2DQ96JZ2 352 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 RHOXF2Q9BQY4 288 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 KATNB1Q9BVA0 655 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 RAB1BQ9H0U4 201 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 OR51I1Q9H343 314 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 TMEM45AQ9NWC5 275 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 KCNE5Q9UJ90 142 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 PCDHB14Q9Y5E9 798 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 FLVCR1Q9Y5Y0 555 aa7.02□□□□□ -1.29
NIF3L1-209ENST00000454952 NBEAL1Q6ZS30 2694 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 TMED7-TICAM2A0A0A6YYA0 188 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 PRSS51A0A1B0GVH4 220 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 A0A1W2PR80 420 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 B9A039 149 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 ZNF587BE7ETH6 402 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 ATP6V1G2-DDX39BF2Z307 99 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 ST8SIA5O15466 376 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 SKAP2O75563 359 aaPredicted RBP7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 VAMP5O95183 116 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 SHBGP04278 402 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 GPIP06744 558 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 OR12D1P0DN82 309 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 G6PDP11413 515 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 ZNF23P17027 643 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 IGFBP5P24593 272 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 CHI3L1P36222 383 aaPredicted RBP7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 SLC1A3P43003 542 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 IDH2P48735 452 aaKnown RBP7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 CLNS1AP54105 237 aaKnown RBP7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 SH3BGRP55822 239 aaPredicted RBP7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 UBE2NP61088 152 aaKnown RBP7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 LRRC74AQ0VAA2 488 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 SCGB2A2Q13296 93 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 SLC17A1Q14916 467 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 EFNB3Q15768 340 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 CARTPTQ16568 116 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 GSTA3Q16772 222 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 ZSWIM7Q19AV6 140 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 GPAT3Q53EU6 434 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 TYW3Q6IPR3 259 aaKnown RBP7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 AAED1Q7RTV5 226 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 CCDC103Q8IW40 242 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 LRRC34Q8IZ02 419 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 RFLNBQ8N5W9 214 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 TRIML2Q8N7C3 387 aa7.01□□□□□ -1.29
NIF3L1-209ENST00000454952 OR4F15Q8NGB8 312 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms