RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 FKRPQ9H9S5 495 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NOX3Q9HBY0 568 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SERINC1Q9NRX5 453 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 RLIMQ9NVW2 624 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TMEM160Q9NX00 188 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ADPRHL2Q9NX46 363 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 UPB1Q9UBR1 384 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DCDC2Q9UHG0 476 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MGAT4BQ9UQ53 548 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SLC9A8Q9Y2E8 581 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 WBP11Q9Y2W2 641 aaKnown RBP5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TMED5Q9Y3A6 229 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TMED7Q9Y3B3 224 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 WDR45Q9Y484 360 aa5.21□□□□□ -1.58
HLA-DPA3-207ENST00000454398 hCG_2039718K7EN88 272 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 WNT9BO14905 357 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 FRS3O43559 492 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TCF21O43680 179 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DNAJA2O60884 412 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 UPK3AO75631 287 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CPSF4O95639 269 aaKnown RBP5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PMS2P2O95744 297 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 HSPA4LO95757 839 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 KRT16P08779 473 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CREB1P16220 341 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TCN1P20061 433 aaPredicted RBP5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CFPP27918 469 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MAPK1P28482 360 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 APOBEC3AP31941 199 aaPredicted RBP5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CRHR1P34998 444 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SERPINF1P36955 418 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CDKN2CP42773 168 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MAGEA8P43361 318 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 KHKP50053 298 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ACTG1P63261 375 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 HPCAP84074 193 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 IL1RL1Q01638 556 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 NAAAQ02083 359 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 HGFACQ04756 655 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CHRNB3Q05901 458 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CEACAM7Q14002 265 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SLC17A1Q14916 467 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MAD2L1BPQ15013 274 aaPredicted RBP5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SYPL1Q16563 259 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 FAM174BQ3ZCQ3 159 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CCDC153Q494R4 210 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 GPAT3Q53EU6 434 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SPANXN4Q5MJ08 99 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 COX20Q5RI15 118 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MRPL2Q5T653 305 aaKnown RBP5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 KRT80Q6KB66 452 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 AAED1Q7RTV5 226 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 RNF130Q86XS8 419 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 RIMKLAQ8IXN7 391 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DEPDC4Q8N2C3 294 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 KDM8Q8N371 416 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ARFGAP2Q8N6H7 521 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ZIC4Q8N9L1 334 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SEMA6DQ8NFY4 1073 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 KIF18AQ8NI77 898 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TMEM234Q8WY98 164 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PROX1Q92786 737 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ROPN1LQ96C74 230 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MTERF3Q96E29 417 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ZNF837Q96EG3 531 aaPredicted RBP5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 AURKBQ96GD4 344 aaPredicted RBP5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PPP3R2Q96LZ3 170 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MUS81Q96NY9 551 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SLC38A2Q96QD8 506 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 KCNS3Q9BQ31 491 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TSPYL1Q9H0U9 437 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 OCEL1Q9H607 264 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DYNLRB1Q9NP97 96 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ATAD3AQ9NVI7 634 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ZDHHC2Q9UIJ5 367 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 OSGIN1Q9UJX0 560 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 FZR1Q9UM11 496 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 AMDHD2Q9Y303 409 aa5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SPIN1Q9Y657 262 aaPredicted RBP5.2□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TLDC2A0PJX2 215 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 LIPT2A6NK58 231 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 FAM157AC9JC47 383 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ZNF587BE7ETH6 402 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 HMGN4O00479 90 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 GPR171O14626 319 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SPRY1O43609 319 aaPredicted RBP5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 ITM2AO43736 263 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 TRIM13O60858 407 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 SCN2BO60939 215 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 LILRA1O75019 489 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 KRT33AO76009 404 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 GSNP06396 782 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PGRP06401 933 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 PRG2P13727 222 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 DAOP14920 347 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 MPGP29372 298 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 THBS4P35443 961 aa5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 CHI3L1P36222 383 aaPredicted RBP5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 RBMXP38159 391 aaKnown RBP5.19□□□□□ -1.58
HLA-DPA3-207ENST00000454398 RPL3P39023 403 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms