RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 GPAT3Q53EU6 434 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 PAQR6Q6TCH4 344 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 KLHL24Q6TFL4 600 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 ANKRD46Q86W74 232 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 CCDC103Q8IW40 242 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 TRIML2Q8N7C3 387 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 OR52E4Q8NGH9 312 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 RAB8BQ92930 207 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 TMEM45BQ96B21 275 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 BOD1Q96IK1 185 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 SLC35A5Q9BS91 424 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 BEX2Q9BXY8 128 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 PIF1Q9H611 641 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 AKTIPQ9H8T0 292 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 OBP2BQ9NPH6 170 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 SLC7A10Q9NS82 523 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 UPB1Q9UBR1 384 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 MARCOQ9UEW3 520 aaPredicted RBP9.54□□□□□ -0.88
USP1-204ENST00000452143 PRDM4Q9UKN5 801 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 FKBP7Q9Y680 259 aa9.54□□□□□ -0.88
USP1-204ENST00000452143 TMED7-TICAM2A0A0A6YYA0 188 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 AGAP5A6NIR3 686 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 CLDN24A6NM45 220 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 E9PBE3 544 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 HMGN4O00479 90 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 SERPINE1P05121 402 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 IGHV4-31P0DP07 118 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 ZNF16P17020 682 aaPredicted RBP9.53□□□□□ -0.88
USP1-204ENST00000452143 USF1P22415 310 aaPredicted RBP9.53□□□□□ -0.88
USP1-204ENST00000452143 CHI3L1P36222 383 aaPredicted RBP9.53□□□□□ -0.88
USP1-204ENST00000452143 SLC1A3P43003 542 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 GZMKP49863 264 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 FOXG1P55316 489 aaPredicted RBP9.53□□□□□ -0.88
USP1-204ENST00000452143 PRPS1P60891 318 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 SLC25A3Q00325 362 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 TSPO2Q5TGU0 170 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 CYB5R2Q6BCY4 276 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 ABHD12BQ7Z5M8 362 aaPredicted RBP9.53□□□□□ -0.88
USP1-204ENST00000452143 NUDCD3Q8IVD9 361 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 ZNF781Q8N8C0 355 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 WDR31Q8NA23 367 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 POMGNT2Q8NAT1 580 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 HTRA1Q92743 480 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 ZG16BQ96DA0 208 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 DNAJA3Q96EY1 480 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 CCDC115Q96NT0 180 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 ZNF317Q96PQ6 595 aaPredicted RBP9.53□□□□□ -0.88
USP1-204ENST00000452143 TRNT1Q96Q11 434 aaKnown RBP9.53□□□□□ -0.88
USP1-204ENST00000452143 PIMREGQ9BSJ6 248 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 SF3B5Q9BWJ5 86 aaKnown RBP9.53□□□□□ -0.88
USP1-204ENST00000452143 SHARPINQ9H0F6 387 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 MOV10Q9HCE1 1003 aaKnown RBP9.53□□□□□ -0.88
USP1-204ENST00000452143 MYOZ1Q9NP98 299 aaPredicted RBP9.53□□□□□ -0.88
USP1-204ENST00000452143 BTNL2Q9UIR0 455 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 OSGIN1Q9UJX0 560 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 TMED7Q9Y3B3 224 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 RAP2CQ9Y3L5 183 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 ATP23Q9Y6H3 246 aa9.53□□□□□ -0.88
USP1-204ENST00000452143 TMEM72A0PK05 275 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 CFAP73A6NFT4 308 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 VWC2LB2RUY7 222 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 ATP6V1G2-DDX39BF2Z307 99 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 AP3D1O14617 1153 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 CPSF4O95639 269 aaKnown RBP9.52□□□□□ -0.89
USP1-204ENST00000452143 GPIP06744 558 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 IMPDH2P12268 514 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 RPS4Y1P22090 263 aaKnown RBP9.52□□□□□ -0.89
USP1-204ENST00000452143 TACR3P29371 465 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 SNRPD2P62316 118 aaKnown RBP9.52□□□□□ -0.89
USP1-204ENST00000452143 LRRC74AQ0VAA2 488 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 GSTA3Q16772 222 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 SWI5Q1ZZU3 235 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 FAM174BQ3ZCQ3 159 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 SPANXN4Q5MJ08 99 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 OTUD3Q5T2D3 398 aaPredicted RBP9.52□□□□□ -0.89
USP1-204ENST00000452143 C9orf135Q5VTT2 229 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 LRRC74BQ6ZQY2 392 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 RNF130Q86XS8 419 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 ZNF440Q8IYI8 595 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 WDR60Q8WVS4 1066 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 CNOT9Q92600 299 aaKnown RBP9.52□□□□□ -0.89
USP1-204ENST00000452143 PPP1R36Q96LQ0 422 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 C1QTNF6Q9BXI9 259 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 SLC38A1Q9H2H9 487 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 HAO1Q9UJM8 370 aa9.52□□□□□ -0.89
USP1-204ENST00000452143 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.52□□□□□ -0.89
USP1-204ENST00000452143 PRAMEF27A3QJZ7 478 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 OR6C65A6NJZ3 312 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 AQP7P3A6NL99 342 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 BIRC5O15392 142 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 ITM2AO43736 263 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 LMX1BO60663 402 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 PDE5AO76074 875 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 VAMP5O95183 116 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 DBIP07108 87 aaKnown RBP9.51□□□□□ -0.89
USP1-204ENST00000452143 CHRM4P08173 479 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 CREB1P16220 341 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 IL7RP16871 459 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 LBPP18428 481 aa9.51□□□□□ -0.89
USP1-204ENST00000452143 CCNA2P20248 432 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms