RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 HIF3AQ9Y2N7 669 aa17.81■□□□□ 0.44
FAM3A-215ENST00000447601 SLC6A5Q9Y345 797 aa17.81■□□□□ 0.44
FAM3A-215ENST00000447601 ADAM18Q9Y3Q7 739 aa17.81■□□□□ 0.44
FAM3A-215ENST00000447601 UGT2A1Q9Y4X1 527 aa17.81■□□□□ 0.44
FAM3A-215ENST00000447601 ADAMTS20P59510 1910 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 LRRTM2O43300 516 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 ALOX12BO75342 701 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 GYPBP06028 91 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 PGCP20142 388 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 ITPKBP27987 946 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 SDC2P34741 201 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 TAS2R43P59537 309 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 RNF4P78317 190 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 PPP1R3BQ86XI6 285 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 C1orf210Q8IVY1 113 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 POMGNT2Q8NAT1 580 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 IFI44Q8TCB0 444 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 METTL21AQ8WXB1 218 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 TIMP4Q99727 224 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 SLC30A2Q9BRI3 323 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 SEMA4CQ9C0C4 833 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 MMP25Q9NPA2 562 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 POLHQ9Y253 713 aa17.8■□□□□ 0.44
FAM3A-215ENST00000447601 OR6C70A6NIJ9 312 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 RGS5O15539 181 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 CDC40O60508 579 aaKnown RBP eCLIP17.79■□□□□ 0.44
FAM3A-215ENST00000447601 CER1O95813 267 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 ONECUT2O95948 504 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 APEHP13798 732 aaKnown RBP17.79■□□□□ 0.44
FAM3A-215ENST00000447601 HNRNPA0Q13151 305 aaKnown RBP17.79■□□□□ 0.44
FAM3A-215ENST00000447601 GGTLC2Q14390 218 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 PLEKHG7Q6ZR37 379 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 OVCH1Q7RTY7 1134 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 OR5W2Q8NH69 310 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 ZC3H10Q96K80 434 aaKnown RBP17.79■□□□□ 0.44
FAM3A-215ENST00000447601 KATNB1Q9BVA0 655 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 ABCB10Q9NRK6 738 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 NOX1Q9Y5S8 564 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 CACNA1EQ15878 2313 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 ASXL3Q9C0F0 2248 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 IGHV3-20A0A0C4DH32 117 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 AGRPO00253 132 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 GABRPO00591 440 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 RNF13O43567 381 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 ASAH2BP0C7U1 165 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 CD53P19397 219 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 EVI2BP34910 448 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 DAB2P98082 770 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 EGR4Q05215 589 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 CBFBQ13951 182 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 PON3Q15166 354 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 GXYLT1Q4G148 440 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 SLC35D3Q5M8T2 416 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 VASNQ6EMK4 673 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 LYSMD2Q8IV50 215 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 NPEPL1Q8NDH3 523 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 MOSPD2Q8NHP6 518 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 AP3S1Q92572 193 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 WDFY2Q96P53 400 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 CNN2Q99439 309 aaKnown RBP17.79■□□□□ 0.44
FAM3A-215ENST00000447601 KLHL1Q9NR64 748 aa17.79■□□□□ 0.44
FAM3A-215ENST00000447601 COL5A1P20908 1838 aaPredicted RBP17.79■□□□□ 0.44
FAM3A-215ENST00000447601 BLOC1S5-TXNDC5H3BN57 136 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 TBX1O43435 398 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 FADS1O60427 444 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 SNX4O95219 450 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 NUDT14O95848 222 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 CLEC2LP0C7M8 214 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 CXCR1P25024 350 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 TNFSF8P32971 234 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 AQP2P41181 271 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 DUSP3P51452 185 aaPredicted RBP17.78■□□□□ 0.44
FAM3A-215ENST00000447601 ERVK-25P63136 954 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 ZNF85Q03923 595 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 DBPQ10586 325 aaPredicted RBP17.78■□□□□ 0.44
FAM3A-215ENST00000447601 EFR3AQ14156 821 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 PHF19Q5T6S3 580 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 BPHLQ86WA6 291 aaPredicted RBP17.78■□□□□ 0.44
FAM3A-215ENST00000447601 MARCH9Q86YJ5 346 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 SYT14Q8NB59 555 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 GALNT6Q8NCL4 622 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 APCDD1LQ8NCL9 501 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 NFAM1Q8NET5 270 aaPredicted RBP17.78■□□□□ 0.44
FAM3A-215ENST00000447601 MOGAT1Q96PD6 335 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 DEPDC7Q96QD5 511 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 GFM1Q96RP9 751 aaKnown RBP17.78■□□□□ 0.44
FAM3A-215ENST00000447601 NMNAT3Q96T66 252 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 HDHD5Q9BXW7 423 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 KCNN2Q9H2S1 579 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 PPIEQ9UNP9 301 aaKnown RBP17.78■□□□□ 0.44
FAM3A-215ENST00000447601 CMAHPQ9Y471 501 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 PCDHGB7Q9Y5F8 929 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 PCDHGB6Q9Y5F9 930 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 SDK1Q7Z5N4 2213 aa17.78■□□□□ 0.44
FAM3A-215ENST00000447601 ARID1BQ8NFD5 2236 aaPredicted RBP17.78■□□□□ 0.44
FAM3A-215ENST00000447601 A0A1W2PQL4 384 aaPredicted RBP17.77■□□□□ 0.44
FAM3A-215ENST00000447601 VSTM2BA6NLU5 285 aa17.77■□□□□ 0.44
FAM3A-215ENST00000447601 CASKO14936 926 aa17.77■□□□□ 0.44
FAM3A-215ENST00000447601 RGS9O75916 674 aaPredicted RBP17.77■□□□□ 0.44
FAM3A-215ENST00000447601 CD14P08571 375 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms