RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 KATNBL1Q9H079 304 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 PHPT1Q9NRX4 125 aaPredicted RBP7.35□□□□□ -1.23
SMG1-202ENST00000446231 NPIPA1Q9UND3 350 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 PI4KAP42356 2102 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 UBAC2Q8NBM4 344 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 OR2AP1Q8NGE2 309 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 SCAMP4Q969E2 229 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 MCOLN1Q9GZU1 580 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 PRO1933Q9H354 126 aa7.35□□□□□ -1.23
SMG1-202ENST00000446231 RTCAO00442 366 aaKnown RBP7.34□□□□□ -1.23
SMG1-202ENST00000446231 CRTAPO75718 401 aaPredicted RBP7.34□□□□□ -1.23
SMG1-202ENST00000446231 RAG2P55895 527 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 PPA1Q15181 289 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 OVCH1Q7RTY7 1134 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 STPG2Q8N412 459 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 MTMR14Q8NCE2 650 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 MCATQ8IVS2 390 aaKnown RBP7.34□□□□□ -1.23
SMG1-202ENST00000446231 LFNGQ8NES3 379 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 HPSE2Q8WWQ2 592 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 SRA1Q9HD15 236 aaKnown RBP7.34□□□□□ -1.23
SMG1-202ENST00000446231 TRIP12Q14669 1992 aaPredicted RBP7.34□□□□□ -1.23
SMG1-202ENST00000446231 EPXP11678 715 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 GP1BBP13224 206 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 UPP1Q16831 310 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 PLA1AQ53H76 456 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 MANEAQ5SRI9 462 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 BPIFB2Q8N4F0 458 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 DOK4Q8TEW6 326 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 LDAHQ9H6V9 325 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 TUBG2Q9NRH3 451 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 C5AR2Q9P296 337 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 HMSDA8MTL9 139 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 SFTA3P0C7M3 94 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 PSMB6P28072 239 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 KCNJ3P48549 501 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 EPHA4P54764 986 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 SPOCK1Q08629 439 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 PTOV1Q86YD1 416 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 L3MBTL4Q8NA19 623 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 SLX1AQ9BQ83 275 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 GPR174Q9BXC1 333 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 A0A0U1RQS6 177 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 KDM4FA0A1W2PPD8 638 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 TANGO2Q6ICL3 276 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 FIGNL1Q6PIW4 674 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 DNM1P34Q6PK57 102 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 MDGA1Q8NFP4 955 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 KLRG1Q96E93 195 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 ZC3HAV1LQ96H79 300 aaKnown RBP7.34□□□□□ -1.23
SMG1-202ENST00000446231 PCYT1BQ9Y5K3 369 aaPredicted RBP7.34□□□□□ -1.23
SMG1-202ENST00000446231 TAPBPO15533 448 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 KLK8O60259 260 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 CXCR1P25024 350 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 TBPL1P62380 186 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 DECR1Q16698 335 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 FRMD1Q8N878 549 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 RELTQ969Z4 430 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 C20orf24Q9BUV8 137 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 NMNAT2Q9BZQ4 307 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 SCN3AQ9NY46 2000 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 GPR89AB7ZAQ6 455 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 LRP3O75074 770 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 SLC16A8O95907 504 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 GPR89BP0CG08 455 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 EEF1A1P68104 462 aaKnown RBP7.34□□□□□ -1.23
SMG1-202ENST00000446231 EEF1A2Q05639 463 aaKnown RBP7.34□□□□□ -1.23
SMG1-202ENST00000446231 EEF1A1P5Q5VTE0 462 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 GIMAP5Q96F15 307 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 KLHL15Q96M94 604 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 TGM7Q96PF1 710 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 TDP1Q9NUW8 608 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 TRAV27A0A087WT01 109 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 MCRIP1C9JLW8 97 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 C4orf17Q53FE4 359 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 NEK7Q8TDX7 302 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 SPACA1Q9HBV2 294 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 SOCS7O14512 581 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 AHCYL2Q96HN2 611 aaKnown RBP7.34□□□□□ -1.23
SMG1-202ENST00000446231 IL17CQ9P0M4 197 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 CLDN4O14493 209 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 DRD2P14416 443 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 NPY4RP50391 375 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 GRM7Q14831 915 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 GDPD4Q6W3E5 623 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 TFGQ92734 400 aaPredicted RBP7.34□□□□□ -1.23
SMG1-202ENST00000446231 FBRSQ9HAH7 460 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 POM121BA6NF01 834 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 TMEM235A6NFC5 223 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 ACOD1A6NK06 481 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 TMEM200CA6NKL6 621 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 HCRTR2O43614 444 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 FOXK2Q01167 660 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 TRAM1L1Q8N609 369 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 HMGCLL1Q8TB92 370 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 SCMH1Q96GD3 660 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 RHOFQ9HBH0 211 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 WIF1Q9Y5W5 379 aa7.34□□□□□ -1.23
SMG1-202ENST00000446231 EIF2B1Q14232 305 aaKnown RBP7.34□□□□□ -1.24
SMG1-202ENST00000446231 SMIM4Q8WVI0 70 aa7.34□□□□□ -1.24
SMG1-202ENST00000446231 HGDQ93099 445 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms